Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq4139 257 3e-66 >seq4139 Length=6164 Score = 257 bits (284), Expect = 3e-66 Identities = 226/282 (80%), Gaps = 0/282 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| ||||||||||||| | | |||| | ||||||||||||||||||| Sbjct 1455 CCCACGCTTTCGCACCTCAGCGTCAGTAATGGACCAGTGAGCCGCCTTCGCCACTGGTGT 1396 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 ||||||| ||||||||| |||||||| |||||| ||||||||| | ||||| | || Sbjct 1395 TCCTCCGAATATCTACGAATTTCACCTCTACACTCGGAATTCCACTCACCTCTTCCATAC 1336 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 |||||| |||| ||||| |||| ||||||||||| | |||||| |||||| Sbjct 1335 TCAAGACTTCCAGTATCAAAGGCAGTTCCGGGGTTGAGCCCCGGGATTTCACCCCTGACT 1276 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | |||||||| || |||||| |||| |||||||| | |||||| ||| ||| || Sbjct 1275 TAAAAGTCCGCCTACGTGCGCTTTACGCCCAGTAAATCCGAACAACGCTAGCCCCCTTCG 1216 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 |||||||||||||||||||||| ||||||||| ||||| ||| Sbjct 1215 TATTACCGCGGCTGCTGGCACGAAGTTAGCCGGGGCTTCTTC 1174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828743178767