Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq1688 80.6 3e-13 seq533 80.6 3e-13 >seq1688 Length=11477 Score = 80.6 bits (88), Expect = 3e-13 Identities = 72/89 (81%), Gaps = 1/89 (1%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATGGA 72 ||||||||||| |||| | |||| ||||||||||| ||||| | || || |||||| Sbjct 3883 TTTACTTTGAATAAATCAAAGCGCTCAAAGCAGGCGATTGCTTGTATGTGCTATCATGGA 3942 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTT 101 |||||| || ||||| | ||||||||||| Sbjct 3943 ATAATAAAAGAGGAC-TTCGGTTCTATTT 3970 >seq533 Length=64277 Score = 80.6 bits (88), Expect = 3e-13 Identities = 126/174 (72%), Gaps = 5/174 (3%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT-GCTCGAATACATTACCATGG 71 ||||| ||||| |||| |||| | |||| || || ||| ||| ||||| ||||| Sbjct 44187 TTTACCTTGAATAAATCAGAGTGCTCAAGACAAGCGTTTCGCTTGAATATTCGTGCATGG 44128 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 |||||| ||| ||||| | |||||| || ||| ||| || || |||| |||||| | Sbjct 44127 AATAATGGAACAGGACTT-CGGTTCG-TTCTGTTGGTCTC-AGAACCGAT-GTAATGGTT 44072 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 || | ||| || |||||| || |||| || | |||||||||||||||| Sbjct 44071 AAGAGGGACAGACGGGGGCATCCGTATCGCTGCGTGAGAGGTGAAATTCTTGGA 44018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511964898080