Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq4139 286 5e-75 >seq4139 Length=6164 Score = 286 bits (316), Expect = 5e-75 Identities = 227/273 (83%), Gaps = 0/273 (0%) Strand=Plus/Minus Query 3 AGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC 62 ||| ||| ||| ||||||||||||||||| ||||||| ||| | ||||| ||| || Sbjct 5528 AGGTGGGTTTCCCGCTTAGATGCCTTCAGCGGTTATCCCGTCCGTATATAGCTACCCTGC 5469 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 ||||| |||| ||||| ||| |||||||| | ||||||||||||||||||||||| Sbjct 5468 TATGCGGCTGGCGCCACAACAGGTCCACCAGAGATACGTCCATCCCGGTCCTCTCGTACT 5409 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | |||||| |||| |||| ||||||| |||||| | |||||||||||||||||||| || Sbjct 5408 AGGGACAGATCCTATCAATATTCCTACACCCACGGCAGATAGGGACCGAACTGTCTCACG 5349 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 |||||||||||||| ||| ||| || |||||| ||||||||||| ||||||||||||| Sbjct 5348 ACGTTCTGAACCCAACTCACGTACCGCTTTAAATGGCGAACAGCCATACCCTTGGGACCT 5289 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 || ||||||||||||| || ||| |||||||| Sbjct 5288 GCTCCAGCCCCAGGATGCGATGAGTCGACATCG 5256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780746469572