Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq4139 387 4e-105 >seq4139 Length=6164 Score = 387 bits (428), Expect = 4e-105 Identities = 297/351 (85%), Gaps = 1/351 (0%) Strand=Plus/Plus Query 150 AGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATC 209 ||||| ||||||| ||||||||||||||| |||||| |||| ||||||||||||||| Sbjct 930 AGGATGAGCCCGCGTTGGATTAGCTAGTTGGTGAGGTAAAGGCTCACCAAGGCGACGATC 989 Query 210 AGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTA 269 |||| | |||||||| ||||| |||||| ||| |||||||||||| ||| ||||||| Sbjct 990 CATAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTA 1049 Query 270 CGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCG 329 ||||||||||||||||||||||||| ||||||||| ||||||||| |||| | |||||| Sbjct 1050 CGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGATCCAGCCATGCCGCG 1109 Query 330 TGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACT 389 |||| |||||||||| | |||| |||||||||| || | |||||||||||||||| Sbjct 1110 TGAGTGATGAAGGCCCTAGGGTTGTAAAGCTCTTTCACCGGTGAAGATAATGACGGTAAC 1169 Query 390 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 449 | || |||||||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct 1170 CGGAGAAGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGC 1229 Query 450 GTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 ||| | |||| ||||| |||||||||| | |||||| || | ||||||| Sbjct 1230 GTTGTTCGGATTTACT-GGGCGTAAAGCGCACGTAGGCGGACTTTTAAGTC 1279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497494014848