Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq533 230 4e-58 seq1688 179 7e-43 seq1873 145 1e-32 >seq533 Length=64277 Score = 230 bits (254), Expect = 4e-58 Identities = 207/256 (81%), Gaps = 3/256 (1%) Strand=Plus/Minus Query 74 TCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132 |||||||||||| | ||||| | ||||| || | ||||| |||||||||||||||||| Sbjct 43551 TCTTAGAGGGACAAGCGGCTTCTAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTGAT 43494 Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192 |||||||||||||| |||| ||||||||||||||||| | || | |||| | || Sbjct 43493 GCCCTTAGATGTTCGGGGCTGCACGCGCGCTACACTGGATGGATCAGCATGTTCTTTTCC 43434 Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252 | | ||| |||| ||||| || | | | ||| | |||| | ||||||| | |||||| Sbjct 43433 TGGCCCGAAAGGGCTGGGCAAACCTCTGAAAACCATCCGTGATCGGGATAGGGAATTGCA 43374 Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312 |||||| | |||||||||||||| || |||||||||| ||||| ||| |||||||||||| Sbjct 43373 ATTATTTCCCTTCAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGATTAC 43314 Query 313 GTCCCTGCCCTTTGTA 328 |||||||||||||||| Sbjct 43313 GTCCCTGCCCTTTGTA 43298 Score = 129 bits (142), Expect = 1e-27 Identities = 135/171 (79%), Gaps = 6/171 (4%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| ||||| | ||||| || | | ||| |||||||||||||||| Sbjct 46739 CTTCTTAGAGGGACAGGCGGCTTCTAGCCGCACGA-GATAGAG-CAATAACAGGTCTGTG 46682 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||||||||||||||||||||||| ||| || || | || | Sbjct 46681 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAAAGAATCAGCGTG-TCTT-- 46625 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGAT 241 || |||||| || | |||||| | | || ||| ||||||| ||||| Sbjct 46624 CCCTGGCCGAGCGGCCCGGGTAACCCGTTGAACCTCCTTCGTGCTAGGGAT 46574 >seq1688 Length=11477 Score = 179 bits (198), Expect = 7e-43 Identities = 170/216 (79%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 113 GGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACA 172 |||||||||||||||||||||||||| ||||| | |||||||||||||||||||||| | Sbjct 10571 GGCAATAACAGGTCTGTGATGCCCTTCGATGTCCGGGGCCGCACGCGCGCTACACTGGTA 10630 Query 173 GAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGT 232 || || | | | ||||| ||| ||||||||||||| || | ||| | | | Sbjct 10631 AGATCAGCGCG--CGTTTCCTTGACCGAAAGGTCTGGGTAAACTATTGAAAACTTACCAT 10688 Query 233 GCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGT 292 | | ||||| | |||||| ||||||||| | | |||||||||| || ||||| | | || Sbjct 10689 GATTGGGATCGGGCATTGAAATTATTGCCCGTGAACGAGGAATTCCCAGTAAACTTGAGT 10748 Query 293 CATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||||| | |||||||||||||||||||||||| Sbjct 10749 CATCAGCTCAAATTGATTACGTCCCTGCCCTTTGTA 10784 >seq1873 Length=17552 Score = 145 bits (160), Expect = 1e-32 Identities = 165/217 (76%), Gaps = 7/217 (3%) Strand=Plus/Plus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| || Sbjct 10778 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCGGGGCCGCACGCGCGCTACATTGAAAG 10837 Query 174 AGCCAACGA--GTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCG 231 | || || ||| | || | || || |||||||| | || | | || Sbjct 10838 ACAAAATGAGCGTTTCTGGTTTTTAACAAAA---CT-AGTAATCTT-TGAATGTTTTTCT 10892 Query 232 TGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTG 291 | ||||||||| | ||||||||| | | ||| |||||||||| || |||||| || | Sbjct 10893 TAATGGGGATAGGGGATTGCAATTGTGCCCCTTGAACGAGGAATTCCCAGTAAGTGCTAG 10952 Query 292 TCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||| ||| | ||||||||||||||||||||||| Sbjct 10953 TCATTAGCTAGTACTGATTACGTCCCTGCCCTTTGTA 10989 Score = 145 bits (160), Expect = 1e-32 Identities = 165/217 (76%), Gaps = 7/217 (3%) Strand=Plus/Plus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| || Sbjct 14203 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCGGGGCCGCACGCGCGCTACATTGAAAG 14262 Query 174 AGCCAACGA--GTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCG 231 | || || ||| | || | || || |||||||| | || | | || Sbjct 14263 ACAAAATGAGCGTTTCTGGTTTTTAACAAAA---CT-AGTAATCTT-TGAATGTTTTTCT 14317 Query 232 TGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTG 291 | ||||||||| | ||||||||| | | ||| |||||||||| || |||||| || | Sbjct 14318 TAATGGGGATAGGGGATTGCAATTGTGCCCCTTGAACGAGGAATTCCCAGTAAGTGCTAG 14377 Query 292 TCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||| ||| | ||||||||||||||||||||||| Sbjct 14378 TCATTAGCTAGTACTGATTACGTCCCTGCCCTTTGTA 14414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947132966656