Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq4139 298 2e-78 >seq4139 Length=6164 Score = 298 bits (330), Expect = 2e-78 Identities = 359/480 (75%), Gaps = 10/480 (2%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGA-CAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| |||||||||| |||| | || ||||||||||||||||||||||| |||| Sbjct 3519 CGAGTCTGAACAGGGCGTTCAGTTCGTCGGATTAGACCCGAAACCAAGTGATCTAGCCAT 3578 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 | |||| ||||||| |||||||||| ||||||| ||||||||| ||||| || | Sbjct 3579 GAGCAGGTTGAAGGTACGGTAACACGTACTGGAGGACCGAACCCATATCTGTTGCAATAG 3638 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 ||||||| ||||| |||||||||||||| || |||||||||| ||||||||||||| Sbjct 3639 ATCGGGATGACTTGTGGCTAGGGGTGAAAGGCCAATCAAACTTGGAGATAGCTGGTTCTC 3698 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAA--GTATCACCATCGGGGGTAGAGCACTGTTAT 238 ||||| |||||||||||| || || | | || ||| |||||||||||||||| Sbjct 3699 CGCGAAATCTATTTAGGTAGAGCGTCGACCGAAT-ACCCCCGGGGGTAGAGCACTGAATG 3757 Query 239 GGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTA 298 ||||| |||| | || ||||| | || |||||||||||| | ||| || Sbjct 3758 GGCTATGGGGACTCACCGTCTTACTGATCCTAATCAAACTCCGAATACCGGGGAGTACTA 3817 Query 299 -CCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACT 357 || || | ||| ||||||||| |||||| ||||| || || || ||| Sbjct 3818 GTCGGCAGACACACGGC--GGGTGCTAACGTCCGTCGTGAAGAGGGAAACAACCCAGACC 3875 Query 358 ATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACA 417 ||||||||| ||| || | | | ||||| | ||||| || || || ||||| Sbjct 3876 GCCAGCTAAGGTCCCAAAGTCATGGTTAAGTGGGA--AACGATGTGGGAAGGCACAGACA 3933 Query 418 GCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 || ||||||||||||| |||||||||| ||||||||||| ||||||||||||||| ||| Sbjct 3934 GCCAGGATGTTGGCTTAGAAGCAGCCA-TCATTTAAAGAAAGCGTAACAGCTCACTGGTC 3992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689480427008