Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq4139 109 1e-21 >seq4139 Length=6164 Score = 109 bits (120), Expect = 1e-21 Identities = 95/117 (81%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| |||||||||||||||| |||||||||||||||||| || ||||||| Sbjct 2845 AGGGCATTTGGTGGATGCCTTGGCATGCACAGGCGATGAAGGACGTGATACGCTGCGATA 2904 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC 117 ||| ||||||| | || || || |||||||||| ||||||||||||||| ||||| Sbjct 2905 AGCGTCGGGGAG-GTGCGAATACCCTTTGATCCGACGATTTCCGAATGGGGCAACCC 2960 Score = 100 bits (110), Expect = 5e-19 Identities = 135/184 (73%), Gaps = 8/184 (4%) Strand=Plus/Plus Query 139 CTGAATACATAGG-TATGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGG 197 ||||||||||||| | | |||||||| || ||||||||||||||||||| | ||| Sbjct 3046 CTGAATACATAGGGTGTAAGAAGCGAACCTGGGGAACTGAAACATCTAAGTACCCAGAGG 3105 Query 198 AAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG--CCTTTAC 255 ||| || ||||| ||||| ||| |||||||||||||||| ||| || | | | Sbjct 3106 AAAGGACATCAAACGAGACTCCGCTAGTAGTGGCGAGCGAACGCGGACCAGGCCAGTGGC 3165 Query 256 GAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCCATAGCGGGTGATAGCCC 315 |||| || | | ||||||| ||||||| ||||||| |||||||||||| Sbjct 3166 TTGATA---GAGT--AAAGTGGAAGAACCTGGAAAGGTTTGCCATAGTGGGTGATAGCCC 3220 Query 316 CGTA 319 |||| Sbjct 3221 CGTA 3224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918335004832