Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq4139 419 8e-115 >seq4139 Length=6164 Score = 419 bits (464), Expect = 8e-115 Identities = 434/566 (77%), Gaps = 23/566 (4%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59 ||||||||| ||||| ||||||| || ||| ||| || ||||| || | | |||| | Sbjct 5121 TCGACTTGTCAGTCTTGCAGTCAGGCAGGCTTATGCCATTGCACTCGACGAAC-GATTTC 5063 Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119 | ||| ||||| ||| | | ||||||||||||| ||| ||||| | ||||||||| Sbjct 5062 CGACCGTTCTGAGCCTACCATCGCGCGCCTCCGTTACTCTTTAGGAGG-CGACCGCCCCA 5004 Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCA 179 || ||||||||||||| ||| |||| |||| ||| | ||||| |||||| ||||| Sbjct 5003 GTCAAACTACCCACCATACACGGTCCTGGACCCGGATAACGGGCCGCAGTTAGACATCCA 4944 Query 180 CTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAG 239 ||| || |||||||||||| | |||||||||| || ||| | || ||| || Sbjct 4943 TATAGGTAAGGGTGGTATTTCAAGGATGACTCCACAATGGCTGGCGCCACTGCTTCAAAG 4884 Query 240 TCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC 299 ||| |||||||||||||||| ||| ||||||||| | |||||||||| ||||| | Sbjct 4883 TCTACCACCTATCCTACACATGCCGACACGAATGCCAGTGTAAAGCTATAGTAAAGGTGC 4824 Query 300 -CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACC 358 |||||||||| |||| |||| ||| | ||||||| || | | | ||||||||| Sbjct 4823 ACGGGGTCTTTCCGTCTAACCGCAGGAACCCCGCATCTTCACGGGGAATTCAATTTCACT 4764 Query 359 GGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACC 418 | | ||| | | |||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct 4763 GAGTCTGCGTTGGAGACAGCGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACC 4704 Query 419 CGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct 4703 CGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTT 4644 Query 479 CAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACC 538 ||||| || | || ||| ||||||||||||||||||||| Sbjct 4643 CAATT------------CAATGCTTG-------CACATCTCCTCTTAACCTTCCAGCACC 4603 Query 539 GGGCAGGCGTCAGTCCGTATACCTCG 564 ||||||||||||| || ||||| ||| Sbjct 4602 GGGCAGGCGTCAGACCCTATACGTCG 4577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702279521152