Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq4139 190 4e-46 >seq4139 Length=6164 Score = 190 bits (210), Expect = 4e-46 Identities = 182/232 (78%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 82 AAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCT 141 ||||| ||||||| || ||| |||||||| |||||| | ||||||| |||| || Sbjct 1144 AAAGAGCTTTACAACCC-TAGGGCCTTCATCACTCACGCGGCATGGCTGGATCAGGCTTG 1086 Query 142 CGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGT 201 || |||||| |||||||||| |||||||||||||||||||||| ||| |||||||||||| Sbjct 1085 CGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGT 1026 Query 202 TCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTA 261 ||| ||||| || | |||||||||| | |||| ||||| | || |||| ||| ||| Sbjct 1025 CCCAGTGTGGCTGATCATCCTCTCAGACCAGCTATGGATCGTCGCCTTGGTGAGCCTTTA 966 Query 262 CCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACACCGATGAATCTTT 313 || | || |||| ||||| ||||| | |||| | | ||||| ||||||| Sbjct 965 CCTCACCAACTAGCTAATCCAACGCGGGCTCATCCTTCTCCGATAAATCTTT 914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068724361024