Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq533 98.7 2e-18 >seq533 Length=64277 Score = 98.7 bits (108), Expect = 2e-18 Identities = 96/116 (83%), Gaps = 6/116 (5%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCT-GTCTGACCAGGC-A 58 ||||||||||||||| | |||||| | |||||| ||||||| ||| || || | | Sbjct 39077 GTACGAGAGGAACCGTAGG-TTCAGAC-ATTTGGTTCATGCGGCTAGTC-GAT-AGACTA 39022 Query 59 GTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 ||| ||||||||||||||||| |||||||| ||||| |||||||||||||||||| Sbjct 39021 ATGCTGCGAAGCTACCATCTGCGGGATTATGACTGAAAGCCTCTAAGTCAGAATCC 38966 Score = 95.1 bits (104), Expect = 2e-17 Identities = 97/123 (79%), Gaps = 3/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | || ||| |||||||||| | | || ||| || ||| Sbjct 30918 GTACGAGAGGAACCGTAGGTTT-AGAC-AATTGGTTTT-GTGTTTGATTGAAAAGTCAGG 30862 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | | | || ||||||||| ||||||||| ||||||||||||||||||||||||| ||| Sbjct 30861 GGCACTAAACTACCATCTAATGGATTATGACTGAACGCCTCTAAGTCAGAATCCAATCCA 30802 Query 121 GAA 123 ||| Sbjct 30801 GAA 30799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819143836928