Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1159 284 1e-71 seq1284 205 7e-48 >seq1159 Length=103958 Score = 284 bits (314), Expect = 1e-71 Identities = 614/910 (67%), Gaps = 9/910 (1%) Strand=Plus/Minus Query 61026 TGAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGA 61085 |||||| || | | || ||||| | |||||||| | || ||||| |||||| || Sbjct 50737 TGAACCTTTACTTCGTGATAATCCAAGACGTTTCGTCGTTTTTCCCATTGAGTATCCTGA 50678 Query 61086 TATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTT 61145 ||||||| | |||||| ||||||||||||| || ||||| || || || ||| | Sbjct 50677 TATTTGGGCGAAATACAAACAGGCGGAAGCTTCATTTTGGACCACTGAAGAAGTAGATCT 50618 Query 61146 GTCCAAAGACATGAATGACTGGGAG-CGTTTATCGAGCGGTGAACAACATTTCATTAAAC 61204 || ||||| | ||| | ||| | | || | ||| |||| ||||| || | Sbjct 50617 TTCGAAAGATCTCAATCATTGGCAAACATTAACCGATAAC-GAACGTCATTTTATCTCCC 50559 Query 61205 ATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTT 61264 |||| || || || ||||| ||||| || || || || || || |||||| | ||||||| Sbjct 50558 ATGTTTTAGCCTTTTTTGCTGCTTCTGATGGAATTGTAAACGAAAATTTAGTTGAACGTT 50499 Query 61265 TCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGG 61324 | || || || || || |||| || |||||||| ||||| || || ||||| || | Sbjct 50498 TTAGTCAAGAAGTTCAGGTAACGGAAGCACGTTGTTTTTACGGTTTTCAAATTGCTATTG 50439 Query 61325 AGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGG 61384 | ||| | ||||| || |||||||| | | || || || || || || | Sbjct 50438 AAAATATTCACTCTGAAATGTACAGCATGTTAATTGAAACTTATATTTCTGATCCAAAAC 50379 Query 61385 AACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATT 61444 || ||| || || || |||||||| ||| | || || || |||||| |||| Sbjct 50378 AAAAAGAATTTTTATTTAACGCCATCGAAACGCTTCCTTGTGTTAAAAAGAAAGCTGATT 50319 Query 61445 GGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTG 61504 |||| || |||||||| | |||| || || || ||||| ||||| || | || |||| Sbjct 50318 GGGCTTTAAATTGGATTAGTAGTAAAAACGCGACTTTTGGGGAACGTTTAGTTGCTTTTG 50259 Query 61505 CGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAAC 61564 ||| || |||||| | || || ||| ||||| || || ||||||||||| || | Sbjct 50258 CGGCCGTTGAGGGTATTTTCTTTTCGGGAAGTTTTGCAGCTATTTTTTGGTTGAAAAAGC 50199 Query 61565 GTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGC 61624 | || | ||||||||| | || || ||||| || || || ||||| || || | | Sbjct 50198 GGGGTTTAATGCCCGGTTTAACGTTTTCTAATGAATTAATTTCGCGCGATGAAGGTTTAC 50139 Query 61625 ATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGC 61684 ||| || |||||| ||| | || | | ||||| | | ||||| |||| | Sbjct 50138 ATTACGAATTTGCTTGTTTATTGTTTACA---TATCTTATTCAAAAGCCGTCAAAGGAAC 50082 Query 61685 GTGTGGGTGAG-ATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCT 61743 || | ||| ||| |||| || ||||| || |||||||||||| | ||||| ||| Sbjct 50081 GTAT-AACGAGTATTATTCGCGATGCGGTTGAAATTGAACAGGAATTTTTAACTGATGCT 50023 Query 61744 TTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTT 61803 | || || | ||||| |||||||| ||||||||||||| ||||| |||||| Sbjct 50022 CTTCCGGTTAGTTTAATCGGGATGAATTGCAATTTAATGTCGCAGTACATTGAGTTTGTT 49963 Query 61804 GCCGACCGTCTGTT-GGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATT 61862 ||||| ||| | || | | |||| | |||| | || ||| | | || ||||| Sbjct 49962 GCCGATCGTTTATTAACTGAACTTGGTTGTGAA-AAATTATACAATTCAACTAATCCATT 49904 Query 61863 TGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGG 61922 |||||| ||| | | || || ||||| || ||||| || |||||| || || Sbjct 49903 TGATTTTATGAATCTTATATCTGATGATGGGCGTACTAATTTCTTTGAGAAAAAGGTTGG 49844 Query 61923 CGACTATCAA 61932 || || ||| Sbjct 49843 GGAGTACCAA 49834 >seq1284 Length=72753 Score = 205 bits (226), Expect = 7e-48 Identities = 908/1426 (64%), Gaps = 40/1426 (3%) Strand=Plus/Minus Query 65414 AAGTGACGATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGAC 65473 ||||| |||| | |||||||| || || || ||||| | || ||| || || || Sbjct 54275 AAGTGGTGATTAACAACTTGGAAATCCCCAGAAAGTACTCTTCGCGTATAAATATTCGAT 54216 Query 65474 GTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATG 65533 ||| |||||||| ||||| | || ||||||||||| || || || || |||||||| Sbjct 54215 GTGTAAGGTTCAAAAGATTCGTTATTTCCTAGAATTTGAGCTGTTGAAGCTGTTGGCATT 54156 Query 65534 GGAGCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCC 65593 || || | | || || |||| | ||||| | | ||| || | ||||| | | Sbjct 54155 GGGGCTAAGAGTAAAGAATTTCTTATTCCGTGTTTATTAATTTTTTCTTTTAATTCTTTC 54096 Query 65594 CAGTTCCACA--TCGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTC 65651 || | ||| | || | | || |||| | |||||||| | ||||| | ||| Sbjct 54095 CAATCCCATAAATCAGATGGA-GTA-ACATTC------CACATATCGTATTGCAAGATTC 54044 Query 65652 CGATACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGAC 65711 | |||| | || ||||| || || | || || || || || | | ||| | || || Sbjct 54043 CTTTACTAACAGGGGAACCTTGGTAAGTTTCATAAACCCCGTCTTTTTCGGCTAATTCAC 53984 Query 65712 AGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGT-CGATTAAGTTCACGT 65770 | || | || | || | |||||| || || || || | || |||| || | | Sbjct 53983 AACTAGCTTCTAAGGCACCGTAATAAAGCGTTTCAAAGATTTGCACGTTTAATTT-ATGG 53925 Query 65771 GCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACT 65830 || || ||| || | || | | ||||| | ||||| || || | ||||||| Sbjct 53924 GCTTCGGGGCTATCAAAGGGGAGTCTCATCAAAATAAAAGCATCTGCTAATCCTTGAATA 53865 Query 65831 CCAATACCGATGGGACGATGACGCAAATTGGAACGTCTC-GCCTCAGGTACAGGGTAGTA 65889 ||||| || ||||| ||||| || |||||| ||| || || || || | ||||| || Sbjct 53864 CCAATTCCAATGGGGCGATGGCGTTTATTGGA-CGTTTCAGCTTCTGGGAGTGGGTAATA 53806 Query 65890 ATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACATGC---ACGATACGTCGCAA 65946 ||| | |||||||| ||| ||||| ||| || || | ||||| | || Sbjct 53805 ATTAACATCGATAACTTTATTTAAATTTTTTGTTACAACTTTTGTGACGATTTTT---AA 53749 Query 65947 TTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAG 66006 || ||| ||||||||| ||| | ||||| | || |||| | || Sbjct 53748 TTTTTCAAAATCAAAACTTTTC---CTGTCGGGTTTAACG---------AACTGGTTAAC 53701 Query 66007 GGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTC 66066 |||| ||||| | || || || || || || ||||||| || || || | ||||| Sbjct 53700 CGCAATTGATGCTAAATTACAAACTGCGATTTCATCAGGAGATGTGTATTCAATGATTTC 53641 Query 66067 GGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCA 66126 |||||| | ||| || | ||| || || |||| ||||| ||||| |||||||| || Sbjct 53640 GGTGCATAAATTGCTACTTTTTATTGTACCTAAATGTTGTTGGTTACTTTTGCGATTACA 53581 Query 66127 TGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTG 66186 || || || |||| ||| || ||||| || || |||| ||| ||| |||| ||||| | Sbjct 53580 AGCGTCTTTATACAACATATATGGAGTTCCAGTTTCAATTTGAGACACAATTATGGCTTT 53521 Query 66187 CCAAAGAGC----GCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTT 66242 ||| | | ||| | || || || | | ||||| |||||||| || Sbjct 53520 CCATAATTCTCTGGCGGGTATTTGGCGAAC--AAATTTTTTCCTTT--TTTCGTAATTTT 53465 Query 66243 CGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGAC 66302 |||| | | |||| ||| ||||| || || | || ||||| | || |||| Sbjct 53464 CGTATAATTCCACGAATTTTTCCCCCCAACAATCAGATAAACCGGGACATTGATGAGGAC 53405 Query 66303 ACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGA 66362 |||| |||||||| ||| | || || || |||||||| |||||| ||||| | Sbjct 53404 ACATTAGCGACCACATTGAATCTTCCTCGACGCGTTTCATAAATAAATCAGGAATCCATA 53345 Query 66363 GGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGA 66422 || || || | ||| | || | || ||| || |||||| || | | Sbjct 53344 AAGCATAAAATAAATCTCTCGCCCTAACTTCTTCAGCCCCAGTATTTTTTTTTAAATTTA 53285 Query 66423 GGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTT 66482 || |||| | || |||||||| ||||| | || || || |||| || | || Sbjct 53284 AAAAATCAACAACATCCGCATGCCACGGTTCTAAATAAATTGCAAACGCTCCAGGTCTTT 53225 Query 66483 TGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGA 66542 | || ||||| ||||| || ||||| ||| || || || || ||||| ||||| | Sbjct 53224 TATTACCCCCTTGATCGACATATCGAGCTGTATTATTAAAAACCCGTAACATTGGTACTA 53165 Query 66543 GCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAA 66602 ||||| || | ||||| || || | || | ||| |||| || |||| || | Sbjct 53164 AACCGTTTGAAATACCATTAGTTCCAGCAATAATCGTGCCTTGTGCTCGAATATTATGGA 53105 Query 66603 CATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGA 66662 | || | ||||| || || || | || || || |||||| | | | | Sbjct 53104 CGTTAACTCCAATTCCTCCCGCACTTTTTGATATAATAGCACATTGTGAGATACATTTAA 53045 Query 66663 ATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTT 66722 | ||||| | || || || || || | | | | | ||||| | ||| || Sbjct 53044 AAATGCCTTGGATTGAATCCTCCGGCATCATTACTAAGAAACATGACGACATTTGTGGGC 52985 Query 66723 TGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGT 66782 ||||| || || | || | || || | ||||| ||||| || | |||||||| Sbjct 52984 GAGGTGTCGCTGCGGCAAATAAAGTCGGACTCGCGTGAGTAAAATACTTCTCAGACATGT 52925 Query 66783 AATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCC 66828 ||||||| || || || | | ||||||| ||| || |||||||| Sbjct 52924 AATTGTAAGTTTCAATAGCTGATTCAATGTCTTCACCGTGAATCCC 52879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397533709387280