Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_033030.1 Length=10107 Score E Sequences producing significant alignments: (Bits) Value seq5069 80.6 2e-11 >seq5069 Length=3611 Score = 80.6 bits (88), Expect = 2e-11 Identities = 232/351 (66%), Gaps = 12/351 (3%) Strand=Plus/Minus Query 8818 TTACTATTTTTACAGATTGTCTTAAAGATACTACTATGCCTATAGAAAA-GTGTAAAATA 8876 |||| | ||||| |||||| | |||||| || |||| | |||||| || | ||| | Sbjct 967 TTACAGTATTTACTGATTGTTTGAAAGATTGTAAATTGCCCAAAGAAAAAGTATTAAA-A 909 Query 8877 CCAGGGAAAACCAGAATTTTTTCTATTAGTCCAGTAGATTTTACTATTCAATTTAGACAA 8936 ||||| ||| ||||||||| ||| ||||||||||||||| || || | ||||| Sbjct 908 CCAGGTTCAACTAGAATTTTTAGTATATCTCCAGTAGATTTTACGATACATGTAAGACAG 849 Query 8937 TATTTTGGTGATTTTATTGCGGCCTATACTGCGGCTCGATTTGATGCAGAACATGCTATT 8996 ||||| |||||| ||| || ||| ||| |||| ||| || || | || Sbjct 848 TATTTCTTAGATTTTGCTGCTGCTTATCAAAAAGCTGGATTAGATATAGGTACTGGTGTT 789 Query 8997 GG--TATCAATGTTGATAGTGAAGAATGGTCTGAATTA---TATCACCGAATAACACTTA 9051 || |||||| | ||||| | ||| || | ||| || | | || | ||| Sbjct 788 GGTATATCAAAG--AATAGTTATATGTGGACTAAGTTAGCTAATAAGCTTTTACAATTTA 731 Query 9052 AACAACAGAATTTTATAGCTGGTGATTATAGTAATTTTGGTCCGGGATTATCTCTTCAAT 9111 | | ||| |||| |||||||||||| ||| ||||| || |||||| | | | Sbjct 730 ATGATAAGA---TTATTGCTGGTGATTATTCTAAATTTGGGCCTAGATTATTAGCTGATT 674 Query 9112 TAGCTGATGCTGTTTTAAATTTAATTATTGATTGGTATAAATTTTATGGTG 9162 | ||| | ||| | ||||| | |||||||||| ||| |||||| Sbjct 673 GTGTAGATAAAGCTTTGGAGTTAATGAGAGATTGGTATACGTTTAATGGTG 623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 32224634191188