Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq8151 345 7e-93 seq1238 324 2e-86 seq4982 197 2e-48 seq3265 196 8e-48 >seq8151 Length=21786 Score = 345 bits (382), Expect = 7e-93 Identities = 246/281 (88%), Gaps = 1/281 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| | |||||||||||||||||||||||||||| Sbjct 5186 TACTGAGCAGTATTACTATCGCAACGACAAGCCATCAGTAGGGTAAAACTAACCTGTCTC 5245 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||| || ||||||||||||||||||||| || Sbjct 5246 ACGACGGTCTAAACCCAGCTCACGTTCCCTTTTGATGGGTGAACAATCCAACGCTTGGCG 5305 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||| || |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5306 AATTTTGTTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 5365 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 5366 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTTGCT 5425 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 ||| | | ||||||||||||||||||| ||||| Sbjct 5426 AAAAACTCTTTAGTACTAAAGGATCGATAGGCCGTGCTTTC 5466 >seq1238 Length=96074 Score = 324 bits (358), Expect = 2e-86 Identities = 222/249 (89%), Gaps = 1/249 (0%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 32939 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTGT 32880 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||||||||||||||||||| | | || ||||| |||||||||||||||||| Sbjct 32879 TAGTGGGTGAACAATCCAACGCTTTGCAATTTTCGCTTCACAATGATAGGAAGAGCCGAC 32820 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct 32819 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTCGGCTGCCACAAACCAGTTATCCC 32760 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 |||||||||||||||||||||||| | || ||| || || ||||||||||||||| Sbjct 32759 TGTGGTAACTTTTCTGGCACCTCTTG-CTAAAAACTCTTTACACAAAAGGATCGATAGGC 32701 Query 272 CACACTTTC 280 | ||||| Sbjct 32700 CGTGCTTTC 32692 >seq4982 Length=39700 Score = 197 bits (218), Expect = 2e-48 Identities = 120/127 (94%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 112 GCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAA 171 |||| |||||| ||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 8239 GCTTGTCGAATTTTGCTTCGCAATGATTGGAAGAGCCGACATCGAAGGATCAAAAAGCAA 8298 Query 172 CGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCAC 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8299 CGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCAC 8358 Query 232 CTCTAGC 238 |||| || Sbjct 8359 CTCTTGC 8365 >seq3265 Length=55633 Score = 196 bits (216), Expect = 8e-48 Identities = 123/133 (92%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 13874 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTTT 13933 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||||||||||| |||||| ||||||| |||||||||||||||||| Sbjct 13934 TGATGGGTGAACAATCCAACGCTTGGCGAATTTTGCTTCGCAATGATAGGAAGAGCCGAC 13993 Query 152 ATCGAAGGATCAA 164 |||||||||| || Sbjct 13994 ATCGAAGGATAAA 14006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854179556256