Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1238 461 2e-127 seq3265 210 7e-52 seq669 170 6e-40 seq1708 114 4e-23 seq8151 109 2e-21 seq103 78.8 3e-12 >seq1238 Length=96074 Score = 461 bits (510), Expect = 2e-127 Identities = 451/579 (78%), Gaps = 53/579 (9%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| |||||| ||| ||||||| ||| |||| |||||||||||||||||||| Sbjct 32645 CTTTTACTCTACGTGAGGTTTCTGTCCTCACTGAGCTGACCTTAGGACACCTGCGTTATT 32586 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||| ||| ||||||||| ||||||||||||||| || |||| || | |||||| Sbjct 32585 CTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCAGTGTCCTCGAAACGGATC 32526 Query 127 -------GG----------------CCCGCGAAGG--ACCTTAACGCCAGAA--AATGGT 159 || | | ||| | ||||| |||| | | || || Sbjct 32525 ACGCGGGGGTTGACATTCCAGTTTTCACCAGAATGCTACCTTCACGCTTGGATCAACCGT 32466 Query 160 ----CGGTG---------AAGAC--------CAGTT-CCGCTTCATTGATTAAGTaaaaa 197 | ||| ||||| ||||| ||||| | || | |||||| | Sbjct 32465 ACTACTGTGCATTCGTACAAGACTGCCGCAACAGTTTCCGCTCAACCGAGTGAGTAAAGA 32406 Query 198 aaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGA-AACGG-CTCCCACTTATTCTACAC 254 | || || ||||||||||| |||| | ||| |||| ||||||||||| |||||| Sbjct 32405 GAACATGAGAGTAGTGGTATTACACTGTTGACCGCGAACGATCTCCCACTTATGCTACAC 32346 Query 255 CTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCG 314 |||||| || | ||| | |||||||||||||||||||||||||||||||||||| Sbjct 32345 CTCTCATTTCTCGTTACAGTACCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCG 32286 Query 315 CTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGT 374 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 32285 CTGATTCTCCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGT 32226 Query 375 GGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACC 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 32225 GGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACC 32166 Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 || ||||||||||||||||| ||||||||||||| ||| ||||||||||||| ||| Sbjct 32165 TTTGAAGAGTCATAGTTACTCCTGCCGTTTACCCGCCCTTATATGAATTTCTTCACGTTG 32106 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||| ||||||||||||||||||||||||||||||| Sbjct 32105 ACATTCA-AGCACTGGGCAGAAATCACATTGCGTCAACA 32068 >seq3265 Length=55633 Score = 210 bits (232), Expect = 7e-52 Identities = 164/194 (85%), Gaps = 9/194 (5%) Strand=Plus/Plus Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGA-----AACGG-CT 238 || ||||||| |||| || | |||||||| ||||| ||| ||| |||| || Sbjct 15094 GAGTAAGTAATGAAACAATGAAAGTAGTGGTTTTTCA---GCGACGACCGCGAACGATCT 15150 Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298 ||||||||| |||||||||||| ||| | |||| | | |||||||||||||||||||| Sbjct 15151 CCCACTTATGCTACACCTCTCATGTCTCCTTACAATGCCAGACTAGAGTCAAGCTCAACA 15210 Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 15211 GGGTCTTCTTTCCCCGCTGATTCTCCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 15270 Query 359 AGTAGATAGGGACA 372 |||||||||||||| Sbjct 15271 AGTAGATAGGGACA 15284 >seq669 Length=137184 Score = 170 bits (188), Expect = 6e-40 Identities = 97/99 (98%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 103245 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAATTTCTTCACGTTG 103186 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||| Sbjct 103185 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 103147 >seq1708 Length=82469 Score = 114 bits (126), Expect = 4e-23 Identities = 82/94 (87%), Gaps = 4/94 (4%) Strand=Plus/Plus Query 446 ATAGTTACTCCCGCCGTTTA----CCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCA 501 |||||||| || |||||||| | |||||||| | |||||||||||| |||||||||| Sbjct 48490 ATAGTTACACCTGCCGTTTATTTACTCGCGCTTGCTGGAATTTCTTCACGTTGACATTCA 48549 Query 502 GAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 ||||||||||||||||||||||||| |||| ||| Sbjct 48550 GAGCACTGGGCAGAAATCACATTGCATCAAAATC 48583 >seq8151 Length=21786 Score = 109 bits (120), Expect = 2e-21 Identities = 96/120 (80%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||| || ||| |||| || ||| |||| |||||||||||||||||||| Sbjct 5513 CTTTTGCTCCACGCGAGGTTTCCGTCCTCGCTGAGCTGGCCTTAGGACACCTGCGTTATT 5572 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||| ||| |||||||||| |||| || |||| || | ||||||| Sbjct 5573 CTTTGACAGATGTACCGCCTCAGTCAAACTCCCCGCCTGGCAGTGTCCTCGAACCGGATC 5632 >seq103 Length=222326 Score = 78.8 bits (86), Expect = 3e-12 Identities = 69/86 (80%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||| ||||| ||||||||| || ||| | |||| | | |||||||||||||||| | Sbjct 44217 CTCCATCTTATGCTACACCTCCCATGTCTCATTACAATGCCAGACTAGAGTCAAGCTCTA 44276 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCC 322 || |||||| ||||| ||||||||| Sbjct 44277 CATGGTCTTTATTCCCTGCTGATTCC 44302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634778102048