Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq955 322 4e-83 seq137 145 6e-30 >seq955 Length=106330 Score = 322 bits (356), Expect = 4e-83 Identities = 1164/1801 (65%), Gaps = 45/1801 (2%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || ||||| |||||||| || ||||||| || ||||| || || |||||||| || Sbjct 60346 ATCAACAGTGAATTGGATCGCGTTCGCAGCCGGTTTCGTCCTCAGGTAATACATGCCAGT 60287 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTC 65196 || | || ||| || | || || || |||| |||||| |||| || || || Sbjct 60286 TTTCAAACCCATTTTCCATGCGTGAAAGTGAATTGATGTTAATTTACCATAGTTGGGTTC 60227 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 |||||||| || || || ||||| ||||| || || || || ||||| || ||||| Sbjct 60226 AGCCACATGAATGTTGAATGACTGGCTCTGGTCTATAAAAGCCCCTCGATCAGCTGCCAT 60167 Query 65257 GTCAATGATACGACGTCCC-GATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315 | |||| | || | | | || ||||||||||| |||||||||| | || || Sbjct 60166 CTGAATGCT-CGTCTTGACTGAAATCTCCCAGACTGTCTTGTACAATTCTCTTATTTCTT 60108 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCAC-GACGTGCAATAATGCGATTACGCATC 65374 | ||||| | ||||| | ||||| || ||| | ||| ||| || | || ||| Sbjct 60107 TGGGAATAGCTTCAATATTTTGGACAGATCCATTGTTGTG-AATGATTAGGTTTTTCATA 60049 Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGG 65434 || |||||| || ||| | |||| | | | || ||| | || | ||| ||| Sbjct 60048 TCTTCATCCCACAAGTCCGCCTCGGTCAGATCTCGCAGCAGATGATGGTTCACGACCTGG 59989 Query 65435 AACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCA 65494 |||||||| ||||| || | || |||||||| ||||| | || || ||||| || Sbjct 59988 AACTCGCCCGACAGGACCCTGCGCTGGTAGATGTTAGACGTAAAAGGCTCGAAGGACTCG 59929 Query 65495 GTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTT 65554 | ||||| || ||||| || || || || || ||||| || || | || | |||||| Sbjct 59928 TTATTGCCGAGGATTTGTGCGGTGGAGGCGGTGGGCATCGGTGCTAATAAGAGCGAGTTT 59869 Query 65555 CGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATCG 65614 || | || | | | || || | | | |||||| ||| | ||| | | | Sbjct 59868 CGGAGACCATGTTTAGCGATTTTTTCTTTGAGAGCACCCCAGTCCCATA--GGTCTGTGG 59811 Query 65615 TCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGG 65674 || | | |||||| || | ||||| | | || || |||| | || || Sbjct 59810 GCGTTTT----GTTCCACATGTCGTATTGCAAGATGCCCTGGCTCACCGGACAGCCCGGG 59755 Query 65675 AAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAA 65734 || | || || || || | || || || | ||||| | || | || || | Sbjct 59754 TAAGTTTCATAAACGCCAATTTTCTCAGCGAGCTCGCAGCTTGCTTCTAACGCACCATAG 59695 Query 65735 TAAATGGTCTCGAAAATGCGTCGATT-AAGTTCACGTGCCTCATCGCTCTCGTACGGCAT 65793 |||||||| |||||||| || |||| || || | ||| | || || || ||||| || Sbjct 59694 TAAATGGTTTCGAAAATCTGTTGATTCAACTTGAT-TGCAGCTTCACTTTCATACGGGAT 59636 Query 65794 ACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACG 65853 || ||||||||| |||| ||||||| |||||||| || || ||||| || ||||| || Sbjct 59635 ACGCATCAGGACGAAAGCATCGGCCAATCCTTGAACACCGATTCCGATCGGCCGATGCCG 59576 Query 65854 CAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAA 65913 || || || | || || || | |||||| | || | || || || || | Sbjct 59575 CATGTTTGAGTTCTTGGCTTCTGGGATCGGGTAGAAGTTCACCTCTATGATTTTGTTTAG 59516 Query 65914 ATTGCGTGTCACCAC-ATGCACGATACGTCGCAATTGTTCG-AAATCAAAATGTTTAGGA 65971 ||| | ||| || || | || || ||| ||| | | |||| | Sbjct 59515 ATTCTG---CACGACGATTTTAGTGACTTCTTTTAGCTTCTCAAAGTTATACGTTTTGTC 59459 Query 65972 CGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACA 66031 ||| | || || || || || || | || || | || || || Sbjct 59458 --ATC---ATTGACG---------AATCTGTTCAGTGCGACGGACGCCAAATTACACACG 59413 Query 66032 GCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATG 66091 || | || || || | || ||||| || || || ||||| ||||||||||| || Sbjct 59412 GCAACTTCATCCGGCGACGTGTACTCAACGATCTCCGTGCAGAGATTACTGCATTTGATA 59353 Query 66092 GTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGA 66151 ||||||| |||| |||||| || || | |||||||| || ||||| | |||||| || Sbjct 59352 GTGCCCAGGTTCTTTTGATTGCTTTTACTGTTGCATGCGTCTTTGTAAAGCATGTATGGG 59293 Query 66152 GTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCAC---- 66207 || ||||| || ||||| | |||||||| || | ||| | | | | || |||| Sbjct 59292 GTCCCGGTTTCGACTTGCGCTTCAATGATAGCCTTCCACAAAACTTGCGCTCTCACTTGC 59233 Query 66208 CGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACC 66267 | || || || | ||| |||| || | || || | | ||||| || || Sbjct 59232 CTCACATATCGTT-TCTCTT---GTTCATATCGCTCATATAACTTCTCGAACTCGTCCCC 59177 Query 66268 CCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTG 66327 ||| |||| ||| | ||||| | ||| || ||||| || ||| || || | || Sbjct 59176 CCAGCAGTCGGCCAGGCCGGGACAGTCGTGGGGGCACATGAGGCTCCATTCGCCGT--TG 59119 Query 66328 TTCT--ACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCT 66385 ||| || | ||| || | || ||||||||||| | || || || || | ||| Sbjct 59118 CTCTCGACTCTTTTCATGAACAAGTCTGGTATCCAGAGCCCATAAAAAAGCTCTCTTGCG 59059 Query 66386 CGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATG 66444 || ||||| | || ||| |||| | | || | ||||||||| || || || || Sbjct 59058 CGAACTTCCTCCTTCCCAGTGTTTTTCTTGAGA-TCCAAGAACTCAAATATATCCGCGTG 59000 Query 66445 CCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTA 66504 ||| || || ||||||| ||||| | ||| |||||| || |||||||||||||| Sbjct 58999 CCACGGCTCGAGGTAGACCGCGAAGGCGCCGGGTCGTTTGTTCCCGCCTTGGTCGACGTA 58940 Query 66505 GCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGT 66564 | ||| ||||| |||| || | ||| |||||||| ||||| || ||| ||||| Sbjct 58939 CCTAGCTGTGTTGTTATAGACGCGGAGCATGGGTACGAGGCCGTTGGAGACGCCGTTGGT 58880 Query 66565 GCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGC 66624 ||| ||||| |||||| || || || ||| || | | || ||||| || || Sbjct 58879 TCCGGCGATGTAGGATCCCTTGGCGCGGATGCAGTGTACGTGAACGCCGATACCGCCCGC 58820 Query 66625 CGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACC 66684 | || |||||| || |||| | || | | ||||| || ||| ||| | Sbjct 58819 TGATTTGGAGATGAGCGCGCAATGTTTGAGCGTGTCGTAGATGCCCTCGATGCTGTCGTC 58760 Query 66685 CTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAG 66744 ||| |||| | |||| |||| || || ||||| ||| ||||| |||||||| || Sbjct 58759 CTTCATGGCGATGAGGAAGCAGGAGGAGAGCTGGGGGCGGGGCGTGGCCGCCGAGAACAG 58700 Query 66745 GGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGC 66804 ||||| | |||||||| ||||| | |||| |||||||| | ||| | | Sbjct 58699 CGTGGGGCTCGCGTGCGTGAAGTACTTCTCTGACAGCAGGTTGTACGTGTTGATAGCGGA 58640 Query 66805 ATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTC 66864 || |||| ||||| ||||| |||| | | ||||||||| | || || || || || Sbjct 58639 GTCGATGTCCTCGCCGTGAATGCCGATGGAAACTCGCATCAGCATGTGCTGGGGACGCTC 58580 Query 66865 G 66865 | Sbjct 58579 G 58579 >seq137 Length=194913 Score = 145 bits (160), Expect = 6e-30 Identities = 143/185 (77%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 61192 CATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAAT 61251 || ||||| ||||| || |||| ||||| || || || || || || ||||||||||| Sbjct 27569 CACTTCATCAAACACGTCCTGGCTTTCTTCGCGGCCTCCGATGGCATTGTCAATGAGAAC 27510 Query 61252 TTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTC 61311 || |||| | ||| | || || ||||| || | || || | || ||||| || ||| Sbjct 27509 TTGGTGGAGAGATTCTCTCAAGAAGTGCAGGTCACTGAAGCAAGATGCTTCTATGGATTC 27450 Query 61312 CAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATC 61371 |||||||| ||||||||||| ||||| ||||||||| | | ||||||||||| |||||| Sbjct 27449 CAGATTGCAATGGAGAATGTACACTCAGAGATGTACTCTCTGCTCATCGATACTTACATC 27390 Query 61372 AGGGA 61376 ||||| Sbjct 27389 AGGGA 27385 Score = 118 bits (130), Expect = 8e-22 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 61399 TTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGG 61458 ||||| ||| | |||||| | ||| || ||| ||| ||||| ||||| || | ||| Sbjct 23592 TTCAACGCCGTGGAGACGCTGCCGTGCGTCAAGAAGAAGGCGGACTGGGCGCTCCAGTGG 23533 Query 61459 ATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGT 61518 ||| ||| | ||||| || || || || || | ||||||| || |||||||| Sbjct 23532 ATCGGCAGCAAGACGGCCACCTTCGGCGAGCGCATCGTGGCATTCGCATCCGTCGAGGGC 23473 Query 61519 GTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCC 61578 |||| ||| || || || | || || ||| |||||||||| || || |||||| Sbjct 23472 ATATTCTTCTCGGGCAGCTTCGCGTCTATATTCTGGATGAAGAAACGCGGTCTGATGCCC 23413 Query 61579 GGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616 |||||||| |||||||||||| |||| || || ||||| Sbjct 23412 GGTCTGACATTCAGCAATGAGATGATCTCTCGTGACGA 23375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397442984866640