Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq4448 192 9e-47 seq4285 183 5e-44 seq1470 176 7e-42 >seq4448 Length=14809 Score = 192 bits (212), Expect = 9e-47 Identities = 176/218 (81%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || |||| |||| |||||||| ||| ||||||||||| | Sbjct 3571 GTACAAAGGGCAGGGACGTAATCGACGCAAGCT-GATGACTCACGCCTACTAGGAATT-C 3514 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || ||||||||| | ||||||||||||| | | |||| || || Sbjct 3513 CTCGTTCATGGGGAATAATTGCAATCCCCAATCCCCATCACGAAGGAGGTTCAGAGGGTT 3454 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||| |||| || || | || | ||| | | |||||||||||||||||| Sbjct 3453 TCCCGATCCTTTCGGACAGGGA---ACACATGCTGAGTCCTTCAGTGTAGCGCGCGTGCA 3397 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||||||||||||||||||||||||||||||||||||| Sbjct 3396 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 3359 >seq4285 Length=15357 Score = 183 bits (202), Expect = 5e-44 Identities = 175/218 (80%), Gaps = 7/218 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || |||| |||| |||||||| ||| ||||||||||| | Sbjct 5982 GTACAAAGGGCAGGGACGTAATCGACGCAAGCT-GATGACTCACGCCTACTAGGAATT-C 5925 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || ||||||||| | ||||||||||||| | | |||| || || Sbjct 5924 CTCGTTCATGGGGAATAATTGCAATCCCCAATCCCCATCACGAAGGAGGTTCAGAGGGTT 5865 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||| |||| || || | || | ||| | | |||||||||||||||||| Sbjct 5864 TCCCGATCCTTTCGGACAGGGA---ACACATGCTGAGTCCTTCAGTGTAGCGCGCGTGCA 5808 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 ||||||||||||||| |||||||||||||||||||||| Sbjct 5807 GCCCAGAACATCTAA-GGCATCACAGACCTGTTATTGC 5771 >seq1470 Length=43379 Score = 176 bits (194), Expect = 7e-42 Identities = 173/218 (79%), Gaps = 9/218 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || |||| |||| |||||||| ||| ||||||||||| | Sbjct 41923 GTACAAAGGGCAGGGACGTAATCGACGCAAGCT-GATGACTCACGCCTACTAGGAATT-C 41980 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || ||||||||| | ||||||| ||| | | |||| || || Sbjct 41981 CTCGTTCATGGGGAATAATTGCAATCCCCAATCCCCA---CGAAGGAGGTTCAGAGGGTT 42037 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||| |||| || || | || | ||| | | |||||||||||||||||| Sbjct 42038 TCCCGATCCTTTCGGACAGGGA---ACACATGCTGAGTCCTTCAGTGTAGCGCGCGTGCA 42094 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||||||||||||||||||||||||||||||||||||| Sbjct 42095 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 42132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751931506430