Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq8230 136 2e-29 seq4448 136 2e-29 seq4285 136 2e-29 seq3111 136 2e-29 seq1470 136 2e-29 >seq8230 Length=5585 Score = 136 bits (150), Expect = 2e-29 Identities = 108/130 (83%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||||||||||||| || |||| ||| Sbjct 106 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGAACGAAGTCAGG 165 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| ||| |||| ||||| ||||||||||||||||| | ||||| Sbjct 166 GGAAACCCTGATGGAGGTTCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 225 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 226 ATAGGGGCGA 235 >seq4448 Length=14809 Score = 136 bits (150), Expect = 2e-29 Identities = 118/144 (82%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| |||||| |||||| | || || |||||| | | ||||| ||||||| Sbjct 4819 GAGTCGGGTTGCTTGGGAGTGCAGCCCAAATCAGGTGGTAAACTCCATCTAAGGCTAAAT 4878 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 || | ||| ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 4879 AT-GACCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAA 4937 Query 159 AAGAGAGTTAAAAAGCACGTGAAA 182 |||||||||||||| |||||||| Sbjct 4938 GAGAGAGTTAAAAAGTACGTGAAA 4961 Score = 136 bits (150), Expect = 2e-29 Identities = 108/130 (83%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||||||||||||| || |||| ||| Sbjct 5567 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGAACGAAGTCAGG 5626 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| ||| |||| ||||| ||||||||||||||||| | ||||| Sbjct 5627 GGAAACCCTGATGGAGGTTCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 5686 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 5687 ATAGGGGCGA 5696 Score = 82.4 bits (90), Expect = 3e-13 Identities = 68/82 (83%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGT-CAAAC 466 ||||||||| |||||||||||||||||||||||| | |||||| ||||| | |||| Sbjct 5370 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTGCGCGAGTCATTGGGAATGAAAAC 5429 Query 467 CCGTGCGCGTAATGAAAGTGAA 488 || |||||||||||||||| Sbjct 5430 CCAAAGGCGTAATGAAAGTGAA 5451 >seq4285 Length=15357 Score = 136 bits (150), Expect = 2e-29 Identities = 118/144 (82%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| |||||| |||||| | || || |||||| | | ||||| ||||||| Sbjct 7232 GAGTCGGGTTGCTTGGGAGTGCAGCCCAAATCAGGTGGTAAACTCCATCTAAGGCTAAAT 7291 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 || | ||| ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 7292 AT-GACCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAA 7350 Query 159 AAGAGAGTTAAAAAGCACGTGAAA 182 |||||||||||||| |||||||| Sbjct 7351 GAGAGAGTTAAAAAGTACGTGAAA 7374 Score = 136 bits (150), Expect = 2e-29 Identities = 108/130 (83%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||||||||||||| || |||| ||| Sbjct 7978 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGAACGAAGTCAGG 8037 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| ||| |||| ||||| ||||||||||||||||| | ||||| Sbjct 8038 GGAAACCCTGATGGAGGTTCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 8097 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 8098 ATAGGGGCGA 8107 Score = 82.4 bits (90), Expect = 3e-13 Identities = 68/82 (83%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGT-CAAAC 466 ||||||||| |||||||||||||||||||||||| | |||||| ||||| | |||| Sbjct 7781 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTGCGCGAGTCATTGGGAATGAAAAC 7840 Query 467 CCGTGCGCGTAATGAAAGTGAA 488 || |||||||||||||||| Sbjct 7841 CCAAAGGCGTAATGAAAGTGAA 7862 >seq3111 Length=21209 Score = 136 bits (150), Expect = 2e-29 Identities = 108/130 (83%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||||||||||||| || |||| ||| Sbjct 1397 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGAACGAAGTCAGG 1456 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| ||| |||| ||||| ||||||||||||||||| | ||||| Sbjct 1457 GGAAACCCTGATGGAGGTTCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 1516 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 1517 ATAGGGGCGA 1526 Score = 132 bits (146), Expect = 2e-28 Identities = 116/143 (81%), Gaps = 1/143 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| |||||| |||||| | || || |||||| | | ||||| ||||||| Sbjct 650 GAGTCGGGTTGCTTGGGAGTGCAGCCCAAATCAGGTGGTAAACTCCATCTAAGGCTAAAT 709 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 || | | ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 710 AT-GACACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAG 768 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||||||||||| |||||||| Sbjct 769 AGAGAGTTAAAAAGTACGTGAAA 791 Score = 127 bits (140), Expect = 9e-27 Identities = 107/130 (82%), Gaps = 1/130 (1%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||| ||||||||||||||||||||||||| || |||| ||| Sbjct 9694 AGAGCGTACACGTTGGG-CCCGAAAGATGGTGAACTATGCCTGGTCAGAACGAAGTCAGG 9636 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| ||| |||| ||||| ||||||||||||||||| | ||||| Sbjct 9635 GGAAACCCTGATGGAGGTTCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 9576 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 9575 ATAGGGGCGA 9566 Score = 82.4 bits (90), Expect = 3e-13 Identities = 68/82 (83%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGT-CAAAC 466 ||||||||| |||||||||||||||||||||||| | |||||| ||||| | |||| Sbjct 1200 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTGCGCGAGTCATTGGGAATGAAAAC 1259 Query 467 CCGTGCGCGTAATGAAAGTGAA 488 || |||||||||||||||| Sbjct 1260 CCAAAGGCGTAATGAAAGTGAA 1281 Score = 82.4 bits (90), Expect = 3e-13 Identities = 68/82 (83%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGT-CAAAC 466 ||||||||| |||||||||||||||||||||||| | |||||| ||||| | |||| Sbjct 9890 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTGCGCGAGTCATTGGGAATGAAAAC 9831 Query 467 CCGTGCGCGTAATGAAAGTGAA 488 || |||||||||||||||| Sbjct 9830 CCAAAGGCGTAATGAAAGTGAA 9809 >seq1470 Length=43379 Score = 136 bits (150), Expect = 2e-29 Identities = 108/130 (83%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||||||||||||| || |||| ||| Sbjct 39951 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGAACGAAGTCAGG 39892 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| ||| |||| ||||| ||||||||||||||||| | ||||| Sbjct 39891 GGAAACCCTGATGGAGGTTCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 39832 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 39831 ATAGGGGCGA 39822 Score = 136 bits (150), Expect = 2e-29 Identities = 118/144 (82%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| |||||| |||||| | || || |||||| | | ||||| ||||||| Sbjct 40671 GAGTCGGGTTGCTTGGGAGTGCAGCCCAAATCAGGTGGTAAACTCCATCTAAGGCTAAAT 40612 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 || | ||| ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 40611 AT-GACCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAA 40553 Query 159 AAGAGAGTTAAAAAGCACGTGAAA 182 |||||||||||||| |||||||| Sbjct 40552 GAGAGAGTTAAAAAGTACGTGAAA 40529 Score = 82.4 bits (90), Expect = 3e-13 Identities = 68/82 (83%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGT-CAAAC 466 ||||||||| |||||||||||||||||||||||| | |||||| ||||| | |||| Sbjct 40148 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTGCGCGAGTCATTGGGAATGAAAAC 40089 Query 467 CCGTGCGCGTAATGAAAGTGAA 488 || |||||||||||||||| Sbjct 40088 CCAAAGGCGTAATGAAAGTGAA 40067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079798327100