Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq4448 239 7e-61 seq4285 232 1e-58 seq1470 223 6e-56 >seq4448 Length=14809 Score = 239 bits (264), Expect = 7e-61 Identities = 205/250 (82%), Gaps = 5/250 (2%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 3419 TCCTTCAGTGTAGCGCGCGTGCAGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 3360 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATA 131 | || | || | |||| | ||| ||||||||||||||| | | ||| | Sbjct 3359 C-TCTATCT-CGTGCGGCTAAACGCCGCCCGTCCCTCTAAGAAGCTGCGAAGGACCCACA 3302 Query 132 GTCGATGG---GGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188 ||| | ||| |||| ||| | |||||||||||||||||||||||||||||| Sbjct 3301 AGGGATCCAACGTCTAGTTAGTAGGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGACA 3242 Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248 |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 3241 AATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTC 3182 Query 249 TCAATCTGTC 258 |||||||||| Sbjct 3181 TCAATCTGTC 3172 >seq4285 Length=15357 Score = 232 bits (256), Expect = 1e-58 Identities = 204/250 (82%), Gaps = 6/250 (2%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 5830 TCCTTCAGTGTAGCGCGCGTGCAGCCCAGAACATCTAAGG-CATCACAGACCTGTTATTG 5772 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATA 131 | || | || | |||| | ||| ||||||||||||||| | | ||| | Sbjct 5771 C-TCTATCT-CGTGCGGCTAAACGCCGCCCGTCCCTCTAAGAAGCTGCGAAGGACCCACA 5714 Query 132 GTCGATGG---GGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188 ||| | ||| |||| ||| | |||||||||||||||||||||||||||||| Sbjct 5713 AGGGATCCAACGTCTAGTTAGTAGGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGACA 5654 Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248 |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 5653 AATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTC 5594 Query 249 TCAATCTGTC 258 |||||||||| Sbjct 5593 TCAATCTGTC 5584 >seq1470 Length=43379 Score = 223 bits (246), Expect = 6e-56 Identities = 203/250 (81%), Gaps = 7/250 (3%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 42072 TCCTTCAGTGTAGCGCGCGTGCAGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 42131 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATA 131 | || | || | |||| | || ||||||||||||||| | | ||| | Sbjct 42132 C-TCTATCT-CGTGCGGCTAAACGCGCCC-GTCCCTCTAAGAAGCTGCGAAGGACCCACA 42188 Query 132 GTCGATGG---GGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188 ||| | ||| |||| ||| | |||||||||||||||||||||||||||||| Sbjct 42189 AGGGATCCAACGTCTAGTTAGTAGGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGACA 42248 Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248 |||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct 42249 AATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACCGAATCAAG-AAGAGCTC 42307 Query 249 TCAATCTGTC 258 |||||||||| Sbjct 42308 TCAATCTGTC 42317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796727425962