Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq8230 347 2e-93 seq3111 347 2e-93 seq1470 342 9e-92 seq4448 340 3e-91 seq4285 338 1e-90 seq8065 327 2e-87 >seq8230 Length=5585 Score = 347 bits (384), Expect = 2e-93 Identities = 257/297 (87%), Gaps = 5/297 (2%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG---GTCATCAGTAGGGTAAAACTAACCTGTC 57 |||| ||| | ||||| || | |||| | |||||||||||||||||||||||||| Sbjct 2532 TACTGAGCAGGATTACTATCGCAACGACCAATGCCATCAGTAGGGTAAAACTAACCTGTC 2473 Query 58 TCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTAC 117 ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 2472 TCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACGCTTGG 2413 Query 118 CGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177 |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct 2412 CGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGC 2353 Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAG 237 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 2352 TATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTG 2293 Query 238 C-CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | | || | |||| | | |||||||||||||||| ||||| || |||||| Sbjct 2292 CTCGAAACTCTCGA-AGCCAAAAGGATCGATAGGCCGTGCTTTCGCAGTCCGTATTC 2237 >seq3111 Length=21209 Score = 347 bits (384), Expect = 2e-93 Identities = 257/297 (87%), Gaps = 5/297 (2%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG---GTCATCAGTAGGGTAAAACTAACCTGTC 57 |||| ||| | ||||| || | |||| | |||||||||||||||||||||||||| Sbjct 3817 TACTGAGCAGGATTACTATCGCAACGACCAATGCCATCAGTAGGGTAAAACTAACCTGTC 3758 Query 58 TCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTAC 117 ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 3757 TCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACGCTTGG 3698 Query 118 CGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177 |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct 3697 CGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGC 3638 Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAG 237 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 3637 TATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTG 3578 Query 238 C-CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | | || | |||| | | |||||||||||||||| ||||| || |||||| Sbjct 3577 CTCGAAACTCTCGA-AGCCAAAAGGATCGATAGGCCGTGCTTTCGCAGTCCGTATTC 3522 Score = 345 bits (382), Expect = 7e-93 Identities = 236/263 (90%), Gaps = 2/263 (1%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 7306 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTAT 7365 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | |||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 7366 TGGTGGGTGAACAATCCAACGCTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCCGAC 7425 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 7426 ATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCC 7485 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGC-CTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 |||||||||||||||| ||||||| || | || | |||| | | |||||||||||||| Sbjct 7486 TGTGGTAACTTTTCTGACACCTCTTGCTCGAAACTCTCGA-AGCCAAAAGGATCGATAGG 7544 Query 271 CCACACTTTCATGGTTTGTATTC 293 || ||||| || |||||| Sbjct 7545 CCGTGCTTTCGCAGTCCGTATTC 7567 >seq1470 Length=43379 Score = 342 bits (378), Expect = 9e-92 Identities = 249/284 (88%), Gaps = 6/284 (2%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG---GTCATCAGTAGGGTAAAACTAACCTGTC 57 |||| ||| | ||||| || | |||| | |||||||||||||||||||||||||| Sbjct 37529 TACTGAGCAGGATTACTATCGCAACGACCAATGCCATCAGTAGGGTAAAACTAACCTGTC 37588 Query 58 TCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTAC 117 ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 37589 TCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACGCTTGG 37648 Query 118 CGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177 |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct 37649 CGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGC 37708 Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAG 237 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 37709 TATGAACGCTTGGC-GCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTG 37767 Query 238 C-CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 | | || | |||| | | |||||||||||||||| ||||| Sbjct 37768 CTCGAAACTCTCGA-AGCCAAAAGGATCGATAGGCCGTGCTTTC 37810 >seq4448 Length=14809 Score = 340 bits (376), Expect = 3e-91 Identities = 256/297 (86%), Gaps = 7/297 (2%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG---GTCATCAGTAGGGTAAAACTAACCTGTC 57 |||| ||| | ||||| || | |||| | |||||||||||||||||||||||||| Sbjct 7985 TACTGAGCAGGATTACTATCGCAACGACCAATGCCATCAGTAGGGTAAAACTAACCTGTC 7926 Query 58 TCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTAC 117 || ||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 7925 TC--GACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACGCTTGG 7868 Query 118 CGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177 |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct 7867 CGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGC 7808 Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAG 237 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 7807 TATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTG 7748 Query 238 C-CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | | || | |||| | | |||||||||||||||| ||||| || |||||| Sbjct 7747 CTCGAAACTCTCGA-AGCCAAAAGGATCGATAGGCCGTGCTTTCGCAGTCCGTATTC 7692 >seq4285 Length=15357 Score = 338 bits (374), Expect = 1e-90 Identities = 256/297 (86%), Gaps = 6/297 (2%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG---GTCATCAGTAGGGTAAAACTAACCTGTC 57 |||| ||| | ||||| || | |||| | ||||||||||||||| |||||||||| Sbjct 13819 TACTGAGCAGGATTACTATCGCAACGACCAATGCCATCAGTAGGGTAAA-CTAACCTGTC 13877 Query 58 TCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTAC 117 ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 13878 TCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACGCTTGG 13937 Query 118 CGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177 |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct 13938 CGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGC 13997 Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAG 237 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 13998 TATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTG 14057 Query 238 C-CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | | || | |||| | | |||||||||||||||| ||||| || |||||| Sbjct 14058 CTCGAAACTCTCGA-AGCCAAAAGGATCGATAGGCCGTGCTTTCGCAGTCCGTATTC 14113 Score = 331 bits (366), Expect = 2e-88 Identities = 255/297 (86%), Gaps = 7/297 (2%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG---GTCATCAGTAGGGTAAAACTAACCTGTC 57 |||| ||| | ||||| || | |||| | |||||||||||||||||||||||||| Sbjct 10402 TACTGAGCAGGATTACTATCGCAACGACCAATGCCATCAGTAGGGTAAAACTAACCTGTC 10343 Query 58 TCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTAC 117 ||| |||||||||||||||||||||||||| |||| |||||||||||||| ||||||| Sbjct 10342 TCACGACGGTCTAAACCCAGCTCACGTTCC-TATTGGTGGGTGAACAATC-AACGCTTGG 10285 Query 118 CGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177 |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct 10284 CGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGC 10225 Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAG 237 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 10224 TATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTG 10165 Query 238 C-CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | | || | |||| | | |||||||||||||||| ||||| || |||||| Sbjct 10164 CTCGAAACTCTCGA-AGCCAAAAGGATCGATAGGCCGTGCTTTCGCAGTCCGTATTC 10109 >seq8065 Length=5948 Score = 327 bits (362), Expect = 2e-87 Identities = 257/300 (86%), Gaps = 8/300 (3%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG---GTCATCAGTAGGGTAAAA-CTAACCTGT 56 |||| ||| | ||||| || | |||| | |||||||||||||||| ||||||||| Sbjct 530 TACTGAGCAGGATTACTATCGCAACGACCAATGCCATCAGTAGGGTAAAAACTAACCTGT 471 Query 57 CTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTA 116 |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 470 CTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACGCTTG 411 Query 117 CCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCA-AAAAGC-AACGT 174 |||||||||||||| |||||||||||||||||||||||||||||| |||||| |||| Sbjct 410 GCGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAAGCGGACGT 351 Query 175 CGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct 350 CGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTC 291 Query 235 TAGC-CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | || | || | |||| | | |||||||||||||||| ||||| || |||||| Sbjct 290 TTGCTCGAAACTCTCGA-AGCCAAAAGGATCGATAGGCCGTGCTTTCGCAGTCCGTATTC 232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854319669312