Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq4448 75.2 1e-11 seq4285 75.2 1e-11 seq1470 75.2 1e-11 >seq4448 Length=14809 Score = 75.2 bits (82), Expect = 1e-11 Identities = 85/108 (79%), Gaps = 7/108 (6%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCT--AATGTATTCGGG 67 || ||||| |||||| || | ||||||||| |||||||||||| ||||| || || Sbjct 2781 AAGCCAACGAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACGAATGT--TCAGG 2725 Query 68 C-GTAA-GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCT 113 | ||| ||||||||||| ||||| |||||| |||| ||||| || || Sbjct 2724 CTGTAGCGCCTGCTTTGAGCACTCCAATTTTTTCAAAGTAAACGTGCT 2677 >seq4285 Length=15357 Score = 75.2 bits (82), Expect = 1e-11 Identities = 85/108 (79%), Gaps = 7/108 (6%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCT--AATGTATTCGGG 67 || ||||| |||||| || | ||||||||| |||||||||||| ||||| || || Sbjct 5192 AAGCCAACGAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACGAATGT--TCAGG 5136 Query 68 C-GTAA-GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCT 113 | ||| ||||||||||| ||||| |||||| |||| ||||| || || Sbjct 5135 CTGTAGCGCCTGCTTTGAGCACTCCAATTTTTTCAAAGTAAACGTGCT 5088 >seq1470 Length=43379 Score = 75.2 bits (82), Expect = 1e-11 Identities = 85/108 (79%), Gaps = 7/108 (6%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCT--AATGTATTCGGG 67 || ||||| |||||| || | ||||||||| |||||||||||| ||||| || || Sbjct 42707 AAGCCAACGAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACGAATGT--TCAGG 42763 Query 68 C-GTAA-GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCT 113 | ||| ||||||||||| ||||| |||||| |||| ||||| || || Sbjct 42764 CTGTAGCGCCTGCTTTGAGCACTCCAATTTTTTCAAAGTAAACGTGCT 42811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595145788068