Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq4285 100 3e-19 seq1470 100 3e-19 seq4448 96.9 4e-18 >seq4285 Length=15357 Score = 100 bits (110), Expect = 3e-19 Identities = 137/184 (74%), Gaps = 8/184 (4%) Strand=Plus/Plus Query 7 AGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-CT-TTGCTCGAATACATT 64 || || ||||||||||||||||| ||| | ||||||||||| || || || ||||| Sbjct 5088 AGCACGTTTACTTTGAAAAAATTGGAGTGCTCAAAGCAGGCGCTACAGCCTGA--ACATT 5145 Query 65 --ACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCC 122 ||||||||||| ||||||||| | ||||||||||| || || || | ||| Sbjct 5146 CGTGCATGGAATAATGGAATAGGACCT-CGGTTCTATTTCGTTGGCTT-TCGGAGTCGAG 5203 Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||| || |||||| | ||| | || | ||||||||||||| Sbjct 5204 GTAATGATTAATAGGGACAGACGGGGGCATTCGTACTGCGACGTTAGAGGTGAAATTCTT 5263 Query 183 GGAT 186 |||| Sbjct 5264 GGAT 5267 >seq1470 Length=43379 Score = 100 bits (110), Expect = 3e-19 Identities = 137/184 (74%), Gaps = 8/184 (4%) Strand=Plus/Minus Query 7 AGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-CT-TTGCTCGAATACATT 64 || || ||||||||||||||||| ||| | ||||||||||| || || || ||||| Sbjct 42811 AGCACGTTTACTTTGAAAAAATTGGAGTGCTCAAAGCAGGCGCTACAGCCTGA--ACATT 42754 Query 65 --ACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCC 122 ||||||||||| ||||||||| | ||||||||||| || || || | ||| Sbjct 42753 CGTGCATGGAATAATGGAATAGGACCT-CGGTTCTATTTCGTTGGCTT-TCGGAGTCGAG 42696 Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||| || |||||| | ||| | || | ||||||||||||| Sbjct 42695 GTAATGATTAATAGGGACAGACGGGGGCATTCGTACTGCGACGTTAGAGGTGAAATTCTT 42636 Query 183 GGAT 186 |||| Sbjct 42635 GGAT 42632 >seq4448 Length=14809 Score = 96.9 bits (106), Expect = 4e-18 Identities = 137/184 (74%), Gaps = 9/184 (5%) Strand=Plus/Plus Query 7 AGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-CT-TTGCTCGAATACATT 64 || || ||||||||||||||||| ||| | ||||||||||| || || || ||||| Sbjct 2677 AGCACGTTTACTTTGAAAAAATTGGAGTGCTCAAAGCAGGCGCTACAGCCTGA--ACATT 2734 Query 65 --ACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCC 122 ||||||||||| ||||||||| | ||||||||||| || || || | ||| Sbjct 2735 CGTGCATGGAATAATGGAATAGGACCT-CGGTTCTATTTCGTTGGCTT-TCGGAGTCGAG 2792 Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||| || ||||| || ||| | || | ||||||||||||| Sbjct 2793 GTAATGATTAATAGGGACAGACGGGGCATTC-GTACTGCGACGTTAGAGGTGAAATTCTT 2851 Query 183 GGAT 186 |||| Sbjct 2852 GGAT 2855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511953366080