Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq4448 205 2e-50 seq4285 197 3e-48 seq1470 192 1e-46 >seq4448 Length=14809 Score = 205 bits (226), Expect = 2e-50 Identities = 205/261 (79%), Gaps = 10/261 (4%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 ||||||||||||||| |||| | ||||| || | | ||| ||||||||||||||| Sbjct 3317 GCTTCTTAGAGGGACGGGCGGCGTTTAGCCGCACGA-GATAGAG-CAATAACAGGTCTGT 3374 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAAC--GAGTTCA 187 |||||||||||||||||||||| |||||||||||||||||| || || | | |||| Sbjct 3375 GATGCCCTTAGATGTTCTGGGCTGCACGCGCGCTACACTGAAGGACTCAGCATGTGTTC- 3433 Query 188 TCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCA 247 | || ||| |||| ||| || | | | || ||| ||||| ||||||| | | | Sbjct 3434 ----CCTGTCCGAAAGGATCGGGAAACCCTCTGAACCTCCTTCGTGATGGGGATTGGGGA 3489 Query 248 TTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTG 307 ||||||||||| | | | |||||||||| ||||||| ||| | ||||||||| |||| | Sbjct 3490 TTGCAATTATTCCCCATGAACGAGGAATTCCTAGTAGGCGTGAGTCATCAGCTTGCGTCG 3549 Query 308 ATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||||| Sbjct 3550 ATTACGTCCCTGCCCTTTGTA 3570 >seq4285 Length=15357 Score = 197 bits (218), Expect = 3e-48 Identities = 204/261 (78%), Gaps = 11/261 (4%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 ||||||||||||||| |||| | ||||| || | | ||| ||||||||||||||| Sbjct 5729 GCTTCTTAGAGGGACGGGCGGCGTTTAGCCGCACGA-GATAGAG-CAATAACAGGTCTGT 5786 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAAC--GAGTTCA 187 |||||| ||||||||||||||| |||||||||||||||||| || || | | |||| Sbjct 5787 GATGCC-TTAGATGTTCTGGGCTGCACGCGCGCTACACTGAAGGACTCAGCATGTGTTC- 5844 Query 188 TCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCA 247 | || ||| |||| ||| || | | | || ||| ||||| ||||||| | | | Sbjct 5845 ----CCTGTCCGAAAGGATCGGGAAACCCTCTGAACCTCCTTCGTGATGGGGATTGGGGA 5900 Query 248 TTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTG 307 ||||||||||| | | | |||||||||| ||||||| ||| | ||||||||| |||| | Sbjct 5901 TTGCAATTATTCCCCATGAACGAGGAATTCCTAGTAGGCGTGAGTCATCAGCTTGCGTCG 5960 Query 308 ATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||||| Sbjct 5961 ATTACGTCCCTGCCCTTTGTA 5981 >seq1470 Length=43379 Score = 192 bits (212), Expect = 1e-46 Identities = 201/260 (77%), Gaps = 12/260 (5%) Strand=Plus/Minus Query 71 GCTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||||| || | ||||| || | | ||| |||||||||||||||| Sbjct 42173 GCTTCTTAGAGGGACGGGCGCGTTTAGCCGCACGA-GATAGAG-CAATAACAGGTCTGTG 42116 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAAC--GAGTTCAT 188 ||||||||||||||||||||| |||||||||||||||||| || || | | |||| Sbjct 42115 ATGCCCTTAGATGTTCTGGGCTGCACGCGCGCTACACTGAAGGACTCAGCATGTGTTC-- 42058 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 | || ||| |||| ||| || | | | || ||| ||||| ||||| | | || Sbjct 42057 ---CCTGTCCGAAAGGATCGGGAAACCCTCTGAACCTCCTTCGTG---GGGATTGGGGAT 42004 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 |||||||||| | | | |||||||||| ||||||| ||| | ||||||||| |||| || Sbjct 42003 TGCAATTATTCCCCATGAACGAGGAATTCCTAGTAGGCGTGAGTCATCAGCTTGCGTCGA 41944 Query 309 TTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||| Sbjct 41943 TTACGTCCCTGCCCTTTGTA 41924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947110944256