Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq4285 488 2e-135 seq4448 484 2e-134 seq8065 354 2e-95 seq4032 122 3e-25 >seq4285 Length=15357 Score = 488 bits (540), Expect = 2e-135 Identities = 422/514 (82%), Gaps = 13/514 (3%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTAC-AAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||| | ||| | | | ||| | ||| ||||| | ||||||||| Sbjct 4874 GTACTCATTCCGATTGCTAAGCCTCGTATGAGTTTAGCATCGTTATTTTTCGTCACTACC 4815 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4814 TCCCCGTGCCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 4755 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 4754 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTACAACCATGGT 4695 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| || ||||||||||| |||||||| |||||| | ||||| || | ||||||| Sbjct 4694 AGGCGCATAACCTACCATCGACAGTTGATAAGGCAGACACTTGAAAGATACGTCGCCGGT 4635 Query 240 TCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACC-----AAGGAGCCCCGAAG-GG 293 | || ||||||||| | |||||||| || ||||| || ||| ||||||| Sbjct 4634 ACGAGACCATGCGATCAGCAAAGTTATTCAGAGTCACCAACAAAACGAG-CCCGAAGACC 4576 Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCTTC--CGA-AGTCGGGGTTTTTAGCATGTA 350 || | | ||| |||||||||| | ||||||| ||| || |||| ||||||| Sbjct 4575 CGATTGGCTTTGATCTAATAAAAGCGCCCCTTCCACGAGGGTTGGGGCCCAGCGCATGTA 4516 Query 351 TTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACT 410 ||||||||||||||||||| |||||||| ||||||| || | ||| || ||| |||||| Sbjct 4515 TTAGCTCTAGAATTACCACAGTTATCCAAGTAGTAA-GTGCGATCTAAGGAACCATAACT 4457 Query 411 GATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGC 470 ||| ||||||||||||||| |||||||| ||| | |||| ||||||||||||||||| Sbjct 4456 GATGTAATGAGCCATTCGCGGTTTCACTTTAT-TTTCGCTTGAACTTAGACATGCATGGC 4398 Query 471 TTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||| Sbjct 4397 TTAATCTTTGAGACAAGCATATGACTACTGGCAG 4364 >seq4448 Length=14809 Score = 484 bits (536), Expect = 2e-134 Identities = 422/514 (82%), Gaps = 14/514 (3%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTAC-AAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||| | ||| | | | ||| | ||| ||||| | ||||||||| Sbjct 2457 GTACTCATTCCGATTGCTAAGCCTCGTATGAGTTTAGCATCGTTATTTTTCGTCACTACC 2398 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2397 TCCCCGTGCCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 2338 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 2337 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTACAACCATGGT 2278 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| || ||||||||||| |||||||| |||||| | ||||| || | ||||||| Sbjct 2277 AGGCGCATAACCTACCATCGACAGTTGATAAGGCAGACACTTGAAAGATACGTCGCCGGT 2218 Query 240 TCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACC-----AAGGAGCCCCGAAG-GG 293 | || ||||||||| | |||||||| || ||||| || ||| ||||||| Sbjct 2217 ACGAGACCATGCGATCAGCAAAGTTATTCAGAGTCACCAACAAAACGAG-CCCGAAGACC 2159 Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCTTC--CGA-AGTCGGGGTTTTTAGCATGTA 350 || | | ||| |||||||||| | ||||||| ||| || |||| ||||||| Sbjct 2158 CGATTGGCTTTGATCTAATAAAAGCGCCCCTTCCACGAGGGTTGGGGCCCAGCGCATGTA 2099 Query 351 TTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACT 410 ||||||||||||||||||| |||||||| ||||||| || | ||| || ||| |||||| Sbjct 2098 TTAGCTCTAGAATTACCACAGTTATCCAAGTAGTAA-GTGCGATCTAAGGAACCATAACT 2040 Query 411 GATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGC 470 ||| ||||||||||||||| |||||||| ||| | |||| ||||||||||||||||| Sbjct 2039 GATGTAATGAGCCATTCGC-GTTTCACTTTAT-TTTCGCTTGAACTTAGACATGCATGGC 1982 Query 471 TTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||| Sbjct 1981 TTAATCTTTGAGACAAGCATATGACTACTGGCAG 1948 >seq8065 Length=5948 Score = 354 bits (392), Expect = 2e-95 Identities = 317/390 (81%), Gaps = 12/390 (3%) Strand=Plus/Minus Query 124 CAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGC 183 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 5948 CAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTACAACCATGGTAGGC 5889 Query 184 CACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAA 243 || ||||||||||| |||||||| |||||| | ||||| || | ||||||| | | Sbjct 5888 GCATAACCTACCATCGACAGTTGATAAGGCAGACACTTGAAAGATACGTCGCCGGTACGA 5829 Query 244 GGCCATGCGATTCGTTAAGTTATTATGAATCACC-----AAGGAGCCCCGAAG-GGCGTT 297 | ||||||||| | |||||||| || ||||| || ||| ||||||| || | Sbjct 5828 GACCATGCGATCAGCAAAGTTATTCAGAGTCACCAACAAAACGAG-CCCGAAGACCCGAT 5770 Query 298 GGTTTTTTATCTAATAAATACACCCCTTC--CGA-AGTCGGGGTTTTTAGCATGTATTAG 354 | ||| |||||||||| | ||||||| ||| || |||| ||||||||||| Sbjct 5769 TGGCTTTGATCTAATAAAAGCGCCCCTTCCACGAGGGTTGGGGCCCAGCGCATGTATTAG 5710 Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATT 414 ||||||||||||||| |||||||| ||||||| || | ||| || ||| ||||||||| Sbjct 5709 CTCTAGAATTACCACAGTTATCCAAGTAGTAA-GTGCGATCTAAGGAACCATAACTGATG 5651 Query 415 TAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAA 474 ||||||||||||||| |||||||| ||| | |||| ||||||||||||||||||||| Sbjct 5650 TAATGAGCCATTCGCGGTTTCACTTTAT-TTTCGCTTGAACTTAGACATGCATGGCTTAA 5592 Query 475 TCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||| Sbjct 5591 TCTTTGAGACAAGCATATGACTACTGGCAG 5562 >seq4032 Length=16363 Score = 122 bits (134), Expect = 3e-25 Identities = 153/204 (75%), Gaps = 16/204 (8%) Strand=Plus/Minus Query 36 GTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCT 95 ||||| ||||| | |||||||||||| |||| || | |||| ||||||||| | |||| Sbjct 13552 GTATCGATATTTTTCGTCACTACCTCCACGTGCCGAAAGTGGGCAATTTGCGCACTTGCT 13493 Query 96 GCCTTCCTTGGATGTGGTAGCCG-TTTCTCAGGCTCCCTCT--CCGGAATCGAACCCTAA 152 |||| ||||| ||||||||||| |||||| | | |||| ||||||||||| ||||| Sbjct 13492 -CCTTGCTTGGGTGTGGTAGCCGTTTTCTCTGCGTTTCTCTAGCCGGAATCGAATCCTAA 13434 Query 153 TTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGG 212 || ||||| | ||| |||| || || |||| |||||| ||||||||||| Sbjct 13433 TT--------ACCGTTCA-ACCGTGGTGAGC--ATAACCTA-CATCGAGAGTTGATAGGG 13386 Query 213 CAGAAATTTGAATGAACCATCGCC 236 || | | ||||| || | ||||| Sbjct 13385 CATACACTTGAAGGATACGTCGCC 13362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510257992192