Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05]
936 sequences; 201,220,334 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq139 188 1e-45
seq177 185 1e-44
>seq139
Length=139565
Score = 188 bits (208), Expect = 1e-45
Identities = 218/293 (74%), Gaps = 48/293 (16%)
Strand=Plus/Minus
Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71
||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 83339 TCCTTCAGTGTAGCGCGCGTGCGGCTCAGAACATCTAAGGGCATCACAGACCTGTTATTG 83280
Query 72 CCTCAAACT--TCCATT--------GGCTGGAAG-CCAATA----------GTCCCTC-- 108
| |||| || | || | ||| || |||| | || | ||
Sbjct 83279 C-TCAATCTCGTGCAGATAGAAGCCGCCTGTCAGTCCAAGAAGATTTGTTTGTACGTCGG 83221
Query 109 ---TAAGAA--GCCAGCCACCAA--------CCATAGTCGATGG----------GGCTAT 145
|||||| ||| | || | || ||| ||| | | ||||
Sbjct 83220 TAGTAAGAACCGCCCGACAGAACTACGGGGGCCTTAGA-GATAGCATAAGTTACGCCTAT 83162
Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 205
|||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 83161 TTAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTA 83102
Query 206 AGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 83101 AGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTATCAATCTGTC 83049
Score = 140 bits (154), Expect = 5e-31
Identities = 88/95 (93%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
|||||||||||| || || ||||||||||||||||||||||||||||||| ||||||||
Sbjct 134833 CTATTTAGCAGGCTAGAGTTTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCA 134774
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATC 236
|||||||||||||||||||||||||||| |||||
Sbjct 134773 ACTAAGAACGGCCATGCACCACCACCCACCGAATC 134739
>seq177
Length=65808
Score = 185 bits (204), Expect = 1e-44
Identities = 214/293 (73%), Gaps = 48/293 (16%)
Strand=Plus/Minus
Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71
||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 16013 TCCTTAAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTA 15954
Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC----------CAGCC 121
| |||| || | |||| |||||| ||| ||||||||| || |
Sbjct 15953 C-TCAATCT-CGTGCGGCTAGAAGCCGCCTGTCAGTCTAAGAAGATTTGTTTGTACATCG 15896
Query 122 ---------ACCAACC-ATAGT-CGATGGGG-------------------------CTAT 145
||| || | || | | |||| ||||
Sbjct 15895 GTAGTAAGAACCGCCCGACAGAACTACGGGGGTCTTAGAGATACCATAAGTTACGCCTAT 15836
Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 205
|||||||| || || ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 15835 TTAGCAGGCTAGAGTTTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTA 15776
Query 206 AGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 15775 AGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTATCAATCTGTC 15723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796792775016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |