Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05] 936 sequences; 201,220,334 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq177 152 1e-34 seq139 150 3e-34 >seq177 Length=65808 Score = 152 bits (168), Expect = 1e-34 Identities = 167/216 (77%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||| ||| ||||| | ||||| || | ||||| ||||||||||||||| Sbjct 15912 CTTCTTAGACTGACAGGCGGCTTCTAGCCGCACGA-GATTGAGT-AATAACAGGTCTGTG 15969 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||||||||||||||||||||| | || || | | || | Sbjct 15970 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTTAAGGAATCAGTGTG-TCTT-- 16026 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || |||||| |||| | |||||| | | || ||| ||||||| ||||| | | ||| Sbjct 16027 CCCTGGCCGAAAGGCCCGGGTAACCCGCTGAACCTCCTTCGTGCTAGGGATTGGGGCTTG 16086 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGC 286 |||||||| | | | |||||||||| || ||||||| Sbjct 16087 CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGC 16122 >seq139 Length=139565 Score = 150 bits (166), Expect = 3e-34 Identities = 144/181 (80%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 83272 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTTCTGAGCCGCACGCGCGCTAC 83330 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 ||||| || || || | || | || |||||| || | | |||||| | | || || Sbjct 83331 ACTGAAGGAATCAGCGTG-TCTT--CCCTGGCCGAAAAGCCCGGGTAACCCGCTGAACCT 83387 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 | ||||||| ||||| | | ||||||||||| | | | |||||||||| || |||||| Sbjct 83388 CCTTCGTGCTAGGGATTGGGGCTTGCAATTATTCCCCATGAACGAGGAATTCCCAGTAAG 83447 Query 286 C 286 | Sbjct 83448 C 83448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947191134208