Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05]
936 sequences; 201,220,334 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq177 152 1e-34
seq139 150 3e-34
>seq177
Length=65808
Score = 152 bits (168), Expect = 1e-34
Identities = 167/216 (77%), Gaps = 6/216 (3%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
||||||||| ||| ||||| | ||||| || | ||||| |||||||||||||||
Sbjct 15912 CTTCTTAGACTGACAGGCGGCTTCTAGCCGCACGA-GATTGAGT-AATAACAGGTCTGTG 15969
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||||||||||||||||||||||||||| | || || | | || |
Sbjct 15970 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTTAAGGAATCAGTGTG-TCTT-- 16026
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|| |||||| |||| | |||||| | | || ||| ||||||| ||||| | | |||
Sbjct 16027 CCCTGGCCGAAAGGCCCGGGTAACCCGCTGAACCTCCTTCGTGCTAGGGATTGGGGCTTG 16086
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGC 286
|||||||| | | | |||||||||| || |||||||
Sbjct 16087 CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGC 16122
>seq139
Length=139565
Score = 150 bits (166), Expect = 3e-34
Identities = 144/181 (80%), Gaps = 4/181 (2%)
Strand=Plus/Plus
Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165
|| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 83272 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTTCTGAGCCGCACGCGCGCTAC 83330
Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225
||||| || || || | || | || |||||| || | | |||||| | | || ||
Sbjct 83331 ACTGAAGGAATCAGCGTG-TCTT--CCCTGGCCGAAAAGCCCGGGTAACCCGCTGAACCT 83387
Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285
| ||||||| ||||| | | ||||||||||| | | | |||||||||| || ||||||
Sbjct 83388 CCTTCGTGCTAGGGATTGGGGCTTGCAATTATTCCCCATGAACGAGGAATTCCCAGTAAG 83447
Query 286 C 286
|
Sbjct 83448 C 83448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947191134208
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |