Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05] 936 sequences; 201,220,334 total letters Query= NC_032139.1 Length=1743 Score E Sequences producing significant alignments: (Bits) Value seq43 138 1e-29 >seq43 Length=518357 Score = 138 bits (152), Expect = 1e-29 Identities = 367/558 (66%), Gaps = 2/558 (0%) Strand=Plus/Plus Query 822 GTCGTTGGAAGTGATGGTAAGGTCTGGGATGTCAATCCTGATCGTACTAAGCGTCGTATT 881 ||| | || || ||||| ||||| ||| |||| || || || || ||||| || || || Sbjct 219504 GTCATCGGTAGCGATGGCAAGGTGTGGAATGTGAACCCCGAGCGAACTAATCGCCGGTTT 219563 Query 882 TCGCGTATGATCGACTATTTTATCAACACTCCAGTTAGACTTTGTAATGGTGAACGTTAT 941 || || ||||| | ||||| || ||||| || || | || || ||| ||| | | Sbjct 219564 TCTCGCTTGATCAAGTATTTCATAAACACGCCGATTCGCCTAGCTACTGGAGAAAGGTTC 219623 Query 942 CGTAAGAGAGGAGGCGTACCTTCTGGGAGTATGTGGACTAACATCGTTGATACTATTGTG 1001 | ||||| || || |||| || || |||| || || || ||||||| || ||| Sbjct 219624 CAGAAGAGCGGGGGAATACCATCAGGCTCAATGTTTACGAATATTATTGATACAATCGTG 219683 Query 1002 AATGCAATAATCAGCAGGTACTGCATTTTTAATACTTCCGGTCGCTTACCTTTGGCAGAT 1061 || || || ||| | || | || ||| |||| | || | || | || ||| Sbjct 219684 AACGCGATTATCTCTCGATATTTGATCTTTCATACAACAGGAGAACTGCCCGTCGCCGAT 219743 Query 1062 ATGTATCTTGGTGATGATCAGTTTGCAGTTGTGGATGGTATAATAAATTTGAATGACATT 1121 ||||| | || ||||| || ||||| || || || | | ||| | || || | Sbjct 219744 ATGTACTTAGGAGATGACCAATTTGCTGTCGTCAGAGGAACTGTTAATATTAACGATTTA 219803 Query 1122 GCTAAATTAATGAATGAAAGTTTTGGTATGGTGTTGCATCCAGATAAGTGCGTGTAT-AC 1180 | | || || ||||| | || | ||||| || || || | | | || Sbjct 219804 CGGACCCTCGCCAAGGACGACTTTGGCACGGACATCCATCCTGAGAAA-GCATATGTGAC 219862 Query 1181 TGAGAATGCTTCGAATGTGCAATTCCTGGGCTATTTCAACAGAAATGGTTTACCATGGAA 1240 |||| || | ||| | ||||| || || |||| ||| || || | | || ||||| Sbjct 219863 AACGAATCCTGCAAATATTCAATTTCTTGGGTATTACAATAGGAACAGGCTTCCCTGGAA 219922 Query 1241 AGGAAACATGTTCCTTGTTGCATCAATGATATTTCCGGAGCGTCCAGTTAATGATAACAT 1300 |||||| |||||||||| || || | || ||| | || || ||||| |||| ||||| Sbjct 219923 AGGAAATATGTTCCTTGACGCTTCCTTTATCTTTTCCGAACGGCCAGTACATGACAACAT 219982 Query 1301 GACACGAGTTTCTAGAGCAATTGGTCAAATGTGGTCGACGCTGCACGGTGGACAAGCCGT 1360 || |||| || | ||| | || ||| ||||| |||| || | || || |||||||| Sbjct 219983 GATCAGAGTAGCTCGCGCAGTCGGCCAACTGTGGACGACAATGTATGGCGGGCAAGCCGT 220042 Query 1361 TAGATGGTGGAATATTGT 1378 | |||||||||| || || Sbjct 220043 TCGATGGTGGAACATAGT 220060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5468745612784