Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq18667 381 1e-103 seq18668 165 1e-38 >seq18667 Length=37089 Score = 381 bits (422), Expect = 1e-103 Identities = 242/260 (93%), Gaps = 2/260 (1%) Strand=Plus/Plus Query 60 GGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAA 119 || || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15913 GGCGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAA 15972 Query 120 TACATTAGCATGGAATAATAGAATAGGACGTGC-GGTTCTATTTTGTTGGTTTCTAGGAC 178 || |||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 15973 TATATTAGCATGGAATAATAGAATAGGACGTTATGGTTCTATTTTGTTGGTTTCTAGGAC 16032 Query 179 CGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAAT 238 | |||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| Sbjct 16033 CATCGTAATGATTAATAGGGACGGTCGGGGGTATCAGTATTCAGTTGTCAGAGGTGAAAT 16092 Query 239 TCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAAT 298 ||||||||||| ||||||||||||||||||||||| || |||||||| |||||||||||| Sbjct 16093 TCTTGGATTTACTGAAGACTAACTACTGCGAAAGCATTTACCAAGGACGTTTTCATTAAT 16152 Query 299 CAGTGAACGAAAGTTAGGGG 318 || |||||||||||||||| Sbjct 16153 CA-AGAACGAAAGTTAGGGG 16171 Score = 165 bits (182), Expect = 1e-38 Identities = 213/288 (74%), Gaps = 12/288 (4%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||| || | |||| || | ||| | || ||||||||||| ||||||||||| | Sbjct 14057 TGCTCTTTACCGAGTGTCGAGGTGGGCCGGCACGTTTACTTTGAACAAATTAGAGTGCTT 14116 Query 100 AAAGCAGGC-----CTTTGCTCGAATAC-ATTAGCATGGAATAATAGAATAGGACGTGCG 153 ||||||||| ||| || |||||| | |||||||||||| ||||||||| | || Sbjct 14117 AAAGCAGGCTAAAACTTCGCCTGAATACTGTGTGCATGGAATAATGGAATAGGACCT-CG 14175 Query 154 GTTCTATTTTGTTGGTTTCTAGGA---CCGCCGTAATGATTAATAGGGATAGTCGGGGGT 210 |||||||||||||||||| | ||| ||| ||||||||||||||| | | ||||| Sbjct 14176 GTTCTATTTTGTTGGTTT-TCGGAACTCCGAGGTAATGATTAATAGGAACGGATGGGGGC 14234 Query 211 GTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAA 270 | ||||| || ||||||||||||||||||| ||||| || ||||| Sbjct 14235 ATTCGTATTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGGACAGAAGCGAA 14294 Query 271 AGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||| || |||| | | ||||||| |||| ||||||||||||| || Sbjct 14295 AGCATTTGCCAAAAACGCTTTCATTGATCA-AGAACGAAAGTTAGAGG 14341 >seq18668 Length=26442 Score = 165 bits (182), Expect = 1e-38 Identities = 213/288 (74%), Gaps = 12/288 (4%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||| || | |||| || | ||| | || ||||||||||| ||||||||||| | Sbjct 8871 TGCTCTTTACCGAGTGTCGAGGTGGGCCGGCACGTTTACTTTGAACAAATTAGAGTGCTT 8930 Query 100 AAAGCAGGC-----CTTTGCTCGAATAC-ATTAGCATGGAATAATAGAATAGGACGTGCG 153 ||||||||| ||| || |||||| | |||||||||||| ||||||||| | || Sbjct 8931 AAAGCAGGCTAAAACTTCGCCTGAATACTGTGTGCATGGAATAATGGAATAGGACCT-CG 8989 Query 154 GTTCTATTTTGTTGGTTTCTAGGA---CCGCCGTAATGATTAATAGGGATAGTCGGGGGT 210 |||||||||||||||||| | ||| ||| ||||||||||||||| | | ||||| Sbjct 8990 GTTCTATTTTGTTGGTTT-TCGGAACTCCGAGGTAATGATTAATAGGAACGGATGGGGGC 9048 Query 211 GTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAA 270 | ||||| || ||||||||||||||||||| ||||| || ||||| Sbjct 9049 ATTCGTATTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGGACAGAAGCGAA 9108 Query 271 AGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||| || |||| | | ||||||| |||| ||||||||||||| || Sbjct 9109 AGCATTTGCCAAAAACGCTTTCATTGATCA-AGAACGAAAGTTAGAGG 9155 Score = 165 bits (182), Expect = 1e-38 Identities = 213/288 (74%), Gaps = 12/288 (4%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||| || | |||| || | ||| | || ||||||||||| ||||||||||| | Sbjct 19789 TGCTCTTTACCGAGTGTCGAGGTGGGCCGGCACGTTTACTTTGAACAAATTAGAGTGCTT 19848 Query 100 AAAGCAGGC-----CTTTGCTCGAATAC-ATTAGCATGGAATAATAGAATAGGACGTGCG 153 ||||||||| ||| || |||||| | |||||||||||| ||||||||| | || Sbjct 19849 AAAGCAGGCTAAAACTTCGCCTGAATACTGTGTGCATGGAATAATGGAATAGGACCT-CG 19907 Query 154 GTTCTATTTTGTTGGTTTCTAGGA---CCGCCGTAATGATTAATAGGGATAGTCGGGGGT 210 |||||||||||||||||| | ||| ||| ||||||||||||||| | | ||||| Sbjct 19908 GTTCTATTTTGTTGGTTT-TCGGAACTCCGAGGTAATGATTAATAGGAACGGATGGGGGC 19966 Query 211 GTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAA 270 | ||||| || ||||||||||||||||||| ||||| || ||||| Sbjct 19967 ATTCGTATTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGGACAGAAGCGAA 20026 Query 271 AGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||| || |||| | | ||||||| |||| ||||||||||||| || Sbjct 20027 AGCATTTGCCAAAAACGCTTTCATTGATCA-AGAACGAAAGTTAGAGG 20073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914958341440