Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq18667 322 8e-86 seq18668 176 7e-42 seq1980 129 9e-28 seq10881 127 3e-27 seq6508 104 4e-20 >seq18667 Length=37089 Score = 322 bits (356), Expect = 8e-86 Identities = 230/262 (88%), Gaps = 7/262 (3%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 16675 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAG 16616 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG- 119 ||||||||||||||||||||||||| | || ||| | ||||||||||||||||| | Sbjct 16615 ACCTGTTATTGCCTCAAACTTCCATCGACTTGAAATCGATAGTCCCTCTAAGAAGTGACT 16556 Query 120 ---CCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGA 176 ||| ||| || | | | |||||||| |||||||||||||||||||||||| | Sbjct 16555 ATACCAGCAA--ATGCTAGCAGCA-CTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCA 16499 Query 177 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 236 ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 16498 ATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATC 16439 Query 237 AAGAAAGAGCTATCAATCTGTC 258 ||||||||||| |||||||||| Sbjct 16438 AAGAAAGAGCTCTCAATCTGTC 16417 Score = 176 bits (194), Expect = 7e-42 Identities = 109/117 (93%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||||| || |||||||||||||||||||||||||||||||||| |||||||| Sbjct 14703 CTAGTTAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCA 14644 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct 14643 ACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTGTCAATCTGTC 14587 Score = 118 bits (130), Expect = 2e-24 Identities = 90/104 (87%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14891 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 14832 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||||| | || |||| || ||| |||||||||||||| Sbjct 14831 -CTCAATC-TCGTGCGGCTAGACGCCGCCTGTCCCTCTAAGAAG 14790 >seq18668 Length=26442 Score = 176 bits (194), Expect = 7e-42 Identities = 109/117 (93%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||||| || |||||||||||||||||||||||||||||||||| |||||||| Sbjct 20435 CTAGTTAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCA 20376 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct 20375 ACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTGTCAATCTGTC 20319 Score = 118 bits (130), Expect = 2e-24 Identities = 90/104 (87%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 20623 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 20564 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||||| | || |||| || ||| |||||||||||||| Sbjct 20563 -CTCAATC-TCGTGCGGCTAGACGCCGCCTGTCCCTCTAAGAAG 20522 Score = 118 bits (130), Expect = 2e-24 Identities = 90/104 (87%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 22333 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 22274 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||||| | || |||| || ||| |||||||||||||| Sbjct 22273 -CTCAATC-TCGTGCGGCTAGACGCCGCCTGTCCCTCTAAGAAG 22232 Score = 75.2 bits (82), Expect = 2e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATC 192 ||| |||||||| || |||||||||||||||||||||||||||||||||| Sbjct 22145 CTAGTTAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATC 22095 >seq1980 Length=42233 Score = 129 bits (142), Expect = 9e-28 Identities = 102/122 (84%), Gaps = 3/122 (2%) Strand=Plus/Minus Query 136 ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACT 195 || || ||| ||| || || |||||||||||||||||||||||||||||||||| || Sbjct 16098 ATAGGCCTAATTAATAGACTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCT 16039 Query 196 CCACCAACTAAGAA---CGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAA 252 ||| ||||||||| |||||||||||||||||||| |||| |||| |||||| |||| Sbjct 16038 GCACTAACTAAGAACGGCGGCCATGCACCACCACCCACCGAATTAAGATAGAGCTGTCAA 15979 Query 253 TC 254 || Sbjct 15978 TC 15977 >seq10881 Length=14456 Score = 127 bits (140), Expect = 3e-27 Identities = 75/78 (96%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 10078 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGC 10137 Query 219 ACCACCACCCATAGAATC 236 ||||||||||| ||||| Sbjct 10138 ACCACCACCCACCGAATC 10155 >seq6508 Length=120281 Score = 104 bits (114), Expect = 4e-20 Identities = 75/85 (88%), Gaps = 4/85 (5%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTA---AG-GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCC 197 ||| |||||||| || || | |||||||||||||||||||||||| ||||||| |||| Sbjct 79554 CTAGTTAGCAGGCTAGATAGAGCCTCGTTCGTTATCGGAATTAACCACACAAATCGCTCC 79495 Query 198 ACCAACTAAGAACGGCCATGCACCA 222 |||||||||||| |||||||||||| Sbjct 79494 ACCAACTAAGAAAGGCCATGCACCA 79470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796596179805