Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq18668 343 3e-92 seq11578 343 3e-92 seq11232 315 1e-83 seq26167 293 4e-77 seq25659 226 5e-57 seq9100 223 6e-56 seq5718 188 1e-45 >seq18668 Length=26442 Score = 343 bits (380), Expect = 3e-92 Identities = 248/283 (88%), Gaps = 5/283 (2%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGAC-GGTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| ||||||||||||||||||||||||||||||| Sbjct 15253 TACTGAGCAGGATTACTATCGCAACGACCGGTCATCAGTAGGGTAAAACTAACCTGTCTC 15194 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||| | ||||||||||||| |||||| || Sbjct 15193 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGCGGGTGAACAATCCGACGCTTGGCG 15134 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 15133 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 15074 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 15073 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCT 15014 Query 240 TCAAA--TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 ||| ||| | | | |||||||||||||||| ||||| Sbjct 15013 GAAAACTCTTCAA--GCCAAAAGGATCGATAGGCCGTGCTTTC 14973 >seq11578 Length=11864 Score = 343 bits (380), Expect = 3e-92 Identities = 248/283 (88%), Gaps = 5/283 (2%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGAC-GGTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| ||||||||||||||||||||||||||||||| Sbjct 915 TACTGAGCAGGATTACTATCGCAACGACCGGTCATCAGTAGGGTAAAACTAACCTGTCTC 974 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||| | ||||||||||||| |||||| || Sbjct 975 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGCGGGTGAACAATCCGACGCTTGGCG 1034 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1035 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 1094 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 1095 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCT 1154 Query 240 TCAAA--TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 ||| ||| | | | |||||||||||||||| ||||| Sbjct 1155 GAAAACTCTTCAA--GCCAAAAGGATCGATAGGCCGTGCTTTC 1195 Score = 343 bits (380), Expect = 3e-92 Identities = 248/283 (88%), Gaps = 5/283 (2%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGAC-GGTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| ||||||||||||||||||||||||||||||| Sbjct 6972 TACTGAGCAGGATTACTATCGCAACGACCGGTCATCAGTAGGGTAAAACTAACCTGTCTC 7031 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||| | ||||||||||||| |||||| || Sbjct 7032 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGCGGGTGAACAATCCGACGCTTGGCG 7091 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 7092 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 7151 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 7152 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCT 7211 Query 240 TCAAA--TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 ||| ||| | | | |||||||||||||||| ||||| Sbjct 7212 GAAAACTCTTCAA--GCCAAAAGGATCGATAGGCCGTGCTTTC 7252 >seq11232 Length=5715 Score = 315 bits (348), Expect = 1e-83 Identities = 204/224 (91%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 28 CGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCC 87 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct 863 CGGTCATCAGTAGGGTAAACCTAACCTATCTCATGACGGTCTAAACCCAGCTCACGTTCC 922 Query 88 CTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGC 147 ||||| | |||||||| |||| |||||| |||||||||| ||| |||||||||||||| Sbjct 923 CTATTGGCGGGTGAACGATCCGACGCTTGGCGAATTCTGCCTCGCAATGATAGGAAGAGC 982 Query 148 CGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 207 |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct 983 CGACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTA 1042 Query 208 TCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAG 251 |||||||||||||||||||| ||||||| || ||| ||| || Sbjct 1043 TCCCTGTGGTAACTTTTCTGACACCTCTTGCTGAAAACTTCAAG 1086 >seq26167 Length=54104 Score = 293 bits (324), Expect = 4e-77 Identities = 235/282 (83%), Gaps = 11/282 (4%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGAC-GGTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||||||| | ||||| || | | |||| ||||||||||||| ||||||||||||||||| Sbjct 17249 TACTAAGCAGGATTACTATAGCGACGACCGGTCATCAGTAGGATAAAACTAACCTGTCTC 17190 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||| |||||||||||||||||||||||| | ||||| ||||||| ||| || || Sbjct 17189 ACGACGGTGTAAACCCAGCTCACGTTCCCTATTGGCGGGTGGACAATCCGACGGTTGGCG 17130 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||| ||||| ||||||| || ||||||| ||||||||||||||||| ||||||||| Sbjct 17129 AATTCCGCTTCACAATGATAGAAAAAGCCGACGTCGAAGGATCAAAAAGCGACGTCGCTA 17070 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 | |||||||||| |||||||||||||||||| ||||||||||||| || ||||||| | | Sbjct 17069 TAAACGCTTGGCCGCCACAAGCCAGTTATCCTTGTGGTAACTTTTGTGACACCTCTTG-C 17011 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCA 281 | || | | |||||||||||||||| |||||| Sbjct 17010 TGAA---------GCCAAAAGGATCGATAGGCCGTGCTTTCA 16978 >seq25659 Length=4411 Score = 226 bits (250), Expect = 5e-57 Identities = 156/175 (89%), Gaps = 1/175 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGAC-GGTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| ||||||||||||||||||||||||||||||| Sbjct 2004 TACTGAGCAGGATTACTATCGCAACGACCGGTCATCAGTAGGGTAAAACTAACCTGTCTC 2063 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||| | ||||||||||||| |||||| || Sbjct 2064 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGCGGGTGAACAATCCGACGCTTGGCG 2123 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGT 174 |||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct 2124 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGTGACGT 2178 >seq9100 Length=133499 Score = 223 bits (246), Expect = 6e-56 Identities = 174/203 (86%), Gaps = 5/203 (2%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGAC-GGTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| |||||||||||||||||||||||||| ||| Sbjct 48512 TACTGAGCAGGATTACAATCGCAACGACCGGTCATCAGTAGGGTAAAACTAACCTATCTT 48453 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||| || | | ||||||||||||| |||||| || Sbjct 48452 ACGACGGTCTAAACCCAGCTCACGTTCCGTA-TGGCGGGTGAACAATCCGACGCTTGGCG 48394 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCC-GACATCGAAGGATCAAAAAGCAACGTCGCT 178 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct 48393 AATTCTGCTTCGCAATGATAGGAAGAGCCTGACATCGAAGGATCAAAAAGCGACGTCGCT 48334 Query 179 ATGAACGCTTGGCTGCCACAAGC 201 | ||| ||| || |||||| || Sbjct 48333 A--AACTCTTAGCCGCCACAGGC 48313 >seq5718 Length=13530 Score = 188 bits (208), Expect = 1e-45 Identities = 130/146 (89%), Gaps = 1/146 (1%) Strand=Plus/Plus Query 107 CCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCC-GACATCGAAGGATCAAA 165 || |||||| |||||||||| ||| ||||||||||||||| ||||||||||||||||| Sbjct 11213 CCGACGCTTGACGAATTCTGCCTCGCAATGATAGGAAGAGCCCGACATCGAAGGATCAAA 11272 Query 166 AAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTC 225 |||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct 11273 AAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGCGGTAACTTTTC 11332 Query 226 TGGCACCTCTAGCCTCAAATTTCGAG 251 || |||||||||| ||| ||| || Sbjct 11333 TGACACCTCTAGCTGAAAACTTCAAG 11358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854174395680