Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq18667 107 1e-21 seq18668 91.5 9e-17 >seq18667 Length=37089 Score = 107 bits (118), Expect = 1e-21 Identities = 84/94 (89%), Gaps = 5/94 (5%) Strand=Plus/Minus Query 31 AAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGT 90 || ||||| ||| ||| |||||||||||||| || ||||||||| ||||||||||| || Sbjct 16874 AAACCAAT-CCGGAAGC-CTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGT 16819 Query 91 GTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||||||||||| ||||||||||| Sbjct 16818 GTACAAAGGGCAGGGACGTAAT-CAACGCAAGCT 16786 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| |||||||||| Sbjct 15092 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 15036 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||||| |||| Sbjct 15035 GGCAGGGACGTAAT-CAACGCGAGCT 15011 >seq18668 Length=26442 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| |||||||||| Sbjct 20824 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 20768 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||||| |||| Sbjct 20767 GGCAGGGACGTAAT-CAACGCGAGCT 20743 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| |||||||||| Sbjct 22534 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 22478 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||||| |||| Sbjct 22477 GGCAGGGACGTAAT-CAACGCGAGCT 22453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300725537900