Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq18667 257 2e-66 seq18668 109 6e-22 >seq18667 Length=37089 Score = 257 bits (284), Expect = 2e-66 Identities = 172/189 (91%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 15916 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATAT 15975 Query 62 ATTACCATGGAATAATAGAATAGGACG-TGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 |||| |||||||||||||||||||||| | ||||||||||||| ||||||||||||| Sbjct 15976 ATTAGCATGGAATAATAGAATAGGACGTTATGGTTCTATTTTGTTGGTTTCTAGGACC-A 16034 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 ||||||||| |||| ||| ||||||||| |||||||||| |||||| ||||||||||| Sbjct 16035 TCGTAATGATTAATAGGGACGGTCGGGGGTATCAGTATTCAGTTGTCAGAGGTGAAATTC 16094 Query 181 TTGGATTTA 189 ||||||||| Sbjct 16095 TTGGATTTA 16103 Score = 109 bits (120), Expect = 6e-22 Identities = 138/185 (75%), Gaps = 10/185 (5%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-----CTTTGCTCGAATAC-AT 63 || ||||||||||| ||||||||| | | ||||||||| ||| || |||||| | Sbjct 14088 ACGTTTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTAAAACTTCGCCTGAATACTGT 14147 Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC-- 121 ||||||||||| ||||||||| | |||||||||||||| ||||| | ||| | || Sbjct 14148 GTGCATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAACTCCGA 14205 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 |||||||| |||| | | | ||||| | ||||| || | |||||||||||| Sbjct 14206 GGTAATGATTAATAGGAACGGATGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCT 14265 Query 182 TGGAT 186 ||||| Sbjct 14266 TGGAT 14270 >seq18668 Length=26442 Score = 109 bits (120), Expect = 6e-22 Identities = 138/185 (75%), Gaps = 10/185 (5%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-----CTTTGCTCGAATAC-AT 63 || ||||||||||| ||||||||| | | ||||||||| ||| || |||||| | Sbjct 8902 ACGTTTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTAAAACTTCGCCTGAATACTGT 8961 Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC-- 121 ||||||||||| ||||||||| | |||||||||||||| ||||| | ||| | || Sbjct 8962 GTGCATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAACTCCGA 9019 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 |||||||| |||| | | | ||||| | ||||| || | |||||||||||| Sbjct 9020 GGTAATGATTAATAGGAACGGATGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCT 9079 Query 182 TGGAT 186 ||||| Sbjct 9080 TGGAT 9084 Score = 109 bits (120), Expect = 6e-22 Identities = 138/185 (75%), Gaps = 10/185 (5%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-----CTTTGCTCGAATAC-AT 63 || ||||||||||| ||||||||| | | ||||||||| ||| || |||||| | Sbjct 19820 ACGTTTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTAAAACTTCGCCTGAATACTGT 19879 Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC-- 121 ||||||||||| ||||||||| | |||||||||||||| ||||| | ||| | || Sbjct 19880 GTGCATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAACTCCGA 19937 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 |||||||| |||| | | | ||||| | ||||| || | |||||||||||| Sbjct 19938 GGTAATGATTAATAGGAACGGATGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCT 19997 Query 182 TGGAT 186 ||||| Sbjct 19998 TGGAT 20002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511869031200