Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq18668 439 7e-121 seq18667 439 7e-121 seq3377 208 2e-51 seq1980 192 2e-46 seq770 147 7e-33 seq9767 118 3e-24 seq3929 102 2e-19 >seq18668 Length=26442 Score = 439 bits (486), Expect = 7e-121 Identities = 420/533 (79%), Gaps = 31/533 (6%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| | || | | ||| || ||||| ||||| | ||||||||| Sbjct 8637 GTACTCATTCCGATTACGGGGCCTCGGATGAGTCCCGTATCGTTATTTTTCGTCACTACC 8578 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8577 TCCCCGTGCCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 8518 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 8517 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACAACCATGGT 8458 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||| |||||||| |||||| ||||||| || | ||||||| Sbjct 8457 AGGCGCAGAACCTACCATCGACAGTTGATAAGGCAGACATTTGAAAGATGCGTCGCCGGT 8398 Query 240 TCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAAGGAG--CCCCGAAGGG-- 293 | || || |||||| | |||||||| || ||||||||| | | | ||| Sbjct 8397 GCGAGACCGTGCGATCAGCAAAAAGTTATTCAGAGTCACCAAGGTGTACGATGTCGGGCA 8338 Query 294 -------------CGTTGGTTTTTTATCTAATAAATACACCCCTTCCG----AAGTCGGG 336 || | | |||| |||||||||| | | ||||||| ||||| Sbjct 8337 CGAGACCCGCCACCGATTGGTTTTGATCTAATAAAAGCGCTCCTTCCGTCTCCGGTCGGA 8278 Query 337 G--TTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA---GTAAGGTAC 391 | | || |||||||||||||||||||||||||| |||||||| ||| || ||||| Sbjct 8277 GCTCTGTTTGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGT-GGGTAC 8219 Query 392 TATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTT 451 | | || ||| ||||||||||||||||||| ||||| ||||||| || | | ||| Sbjct 8218 GAACTAAGGAACCATAACTGATTTAATGAGCCTTTCGCGGTTTCACCTTA-ATACGGCTC 8160 Query 452 ATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8159 GTACTGAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 8107 Score = 127 bits (140), Expect = 6e-27 Identities = 140/182 (77%), Gaps = 11/182 (6%) Strand=Plus/Minus Query 301 TTTTTATCTAATAAATACACCCCTTCCGAA----GTCGGGGTTTT--TAGCATGTATTAG 354 |||| |||||||||| | | ||||||| ||||| | | | | ||||||||||| Sbjct 19646 TTTTGATCTAATAAAAGCGCTCCTTCCGTCTCCGGTCGGAGCTCTGTTTGCATGTATTAG 19587 Query 355 CTCTAGAATTACCACGGTTATCCATGTA---GTAAGGTACTATCAAATAAACGATAACTG 411 ||||||||||||||| |||||||| ||| || ||||| | | || ||| ||||||| Sbjct 19586 CTCTAGAATTACCACAGTTATCCAAGTAAATGT-GGGTACGAACTAAGGAACCATAACTG 19528 Query 412 ATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCT 471 |||||||||||| ||||| |||||| || | | ||| |||| |||||||||||||| Sbjct 19527 ATTTAATGAGCCTTTCGCGCTTTCACCTTA-ATACGGCTCGTACTGAGACATGCATGGCT 19469 Query 472 TA 473 || Sbjct 19468 TA 19467 Score = 98.7 bits (108), Expect = 3e-18 Identities = 57/59 (97%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 446 TTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9500 TTGCTTTTACTGAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 9442 >seq18667 Length=37089 Score = 439 bits (486), Expect = 7e-121 Identities = 420/533 (79%), Gaps = 31/533 (6%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| | || | | ||| || ||||| ||||| | ||||||||| Sbjct 13823 GTACTCATTCCGATTACGGGGCCTCGGATGAGTCCCGTATCGTTATTTTTCGTCACTACC 13764 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13763 TCCCCGTGCCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 13704 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 13703 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACAACCATGGT 13644 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||| |||||||| |||||| ||||||| || | ||||||| Sbjct 13643 AGGCGCAGAACCTACCATCGACAGTTGATAAGGCAGACATTTGAAAGATGCGTCGCCGGT 13584 Query 240 TCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAAGGAG--CCCCGAAGGG-- 293 | || || |||||| | |||||||| || ||||||||| | | | ||| Sbjct 13583 GCGAGACCGTGCGATCAGCAAAAAGTTATTCAGAGTCACCAAGGTGTACGATGTCGGGCA 13524 Query 294 -------------CGTTGGTTTTTTATCTAATAAATACACCCCTTCCG----AAGTCGGG 336 || | | |||| |||||||||| | | ||||||| ||||| Sbjct 13523 CGAGACCCGCCACCGATTGGTTTTGATCTAATAAAAGCGCTCCTTCCGTCTCCGGTCGGA 13464 Query 337 G--TTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA---GTAAGGTAC 391 | | || |||||||||||||||||||||||||| |||||||| ||| || ||||| Sbjct 13463 GCTCTGTTTGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGT-GGGTAC 13405 Query 392 TATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTT 451 | | || ||| ||||||||||||||||||| ||||| ||||||| || | | ||| Sbjct 13404 GAACTAAGGAACCATAACTGATTTAATGAGCCTTTCGCGGTTTCACCTTA-ATACGGCTC 13346 Query 452 ATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13345 GTACTGAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 13293 Score = 181 bits (200), Expect = 3e-43 Identities = 106/110 (96%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||| Sbjct 15717 GTACTCATTCCAATTACAAGACCCGAAAGGGCCCTGTATCGTTATTTATTGTCACTACCT 15658 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGT 110 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15657 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGT 15608 >seq3377 Length=48210 Score = 208 bits (230), Expect = 2e-51 Identities = 154/180 (86%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 37 TATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTG 96 |||| ||||| | ||||||||||||||||| ||||| |||||||||| ||||||| ||| Sbjct 28625 TATCGTTATTTTTCGTCACTACCTCCCCGTGCCGGGAGTGGGTAATTTCCGCGCCTTCTG 28566 Query 97 CCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCC 156 |||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||| | Sbjct 28565 CCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCACTCTCCGGAACCGAACCCTGATTGC 28506 Query 157 CCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGA 216 |||||||||||| ||||||||| | | ||||||||||| || ||||| || ||| Sbjct 28505 CCGTTACCCGTTACAACCATGGTAAGAGCAGAACCTACCATCGACAGCTGATAAGGTAGA 28446 Score = 179 bits (198), Expect = 1e-42 Identities = 144/174 (83%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| ||||||||||| ||||| ||||||||||||||||||||| || ||||||||| Sbjct 27102 TATTTTCCGTCACTACCTCTCCGTGCCGGGATTGGGTAATTTGCGCGTCTTCTGCCTTCC 27043 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 |||||||||||||||||||||||| | | |||||||||| |||||||| ||| |||| || Sbjct 27042 TTGGATGTGGTAGCCGTTTCTCAGTCCCACTCTCCGGAACCGAACCCTGATTTCCCGCTA 26983 Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGA 216 |||||| || |||||||| | |||| |||| | || ||||| || ||| Sbjct 26982 CCCGTTACAACGATGGTAGGAGCAGAACCTATCATCAACAGCTGATAAGGTAGA 26929 >seq1980 Length=42233 Score = 192 bits (212), Expect = 2e-46 Identities = 185/236 (78%), Gaps = 1/236 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| | | | | || || |||| ||||| | || |||||| Sbjct 15242 GTACTCATTCCGATTACGGGGTCTCGGATAAGTCCCATATCGTTATTTTTCGTTACTACC 15183 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 ||||||| | ||| |||||||||||||||| ||||| ||||||||||||||||||| || Sbjct 15182 TCCCCGTACCAGGAATGGGTAATTTGCGCGCTTGCTGTCTTCCTTGGATGTGGTAGCTGT 15123 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||||| | | || |||||||| | ||| ||| | ||||||||||| | || ||||| Sbjct 15122 TTCTCAGGTTTCTTCGTCGGAATCGGATCCTGATTTCTCGTTACCCGTTAAAACTATGGT 15063 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGC 235 |||| | || | ||||||||||||||| |||||| ||||||| || | |||| Sbjct 15062 AGGCGCAGAGCCAATCATCGAAAGTTGATAAGGCAGACATTTGAAAGATGCGTCGC 15007 >seq770 Length=36114 Score = 147 bits (162), Expect = 7e-33 Identities = 127/154 (82%), Gaps = 5/154 (3%) Strand=Plus/Plus Query 341 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA---GTAAGGTACTATCAA 397 || |||||||||||||||||||||||||| |||| ||| ||| || || ||| | | | Sbjct 13185 TTTGCATGTATTAGCTCTAGAATTACCACAGTTACCCAAGTAAATGTGAG-TACGAACTA 13243 Query 398 ATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTT 457 | |||| ||||||||||||||||||| |||| | ||||| || | | ||| |||| Sbjct 13244 AGAAACTATAACTGATTTAATGAGCCTTTCGTGGGTTCACCTTA-ATACGGCTCGTACTG 13302 Query 458 AGACATGCATGGCTTAATCTTTGAGACAAGCATA 491 |||||||||||||||||||||||||||||||||| Sbjct 13303 AGACATGCATGGCTTAATCTTTGAGACAAGCATA 13336 >seq9767 Length=64490 Score = 118 bits (130), Expect = 3e-24 Identities = 80/90 (89%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 94 CTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAAT 153 |||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||| || Sbjct 32334 CTGCCTTCCTTGCATGAGGTAGCCGTTTCTCAGGCTCCCTCTCCGAAATCGAACCCTGAT 32275 Query 154 TCCCCGTTACCCGTTGATACCATGGTAGGC 183 || ||||||||||| ||||||||| || Sbjct 32274 TCTTCGTTACCCGTTACAACCATGGTAAGC 32245 >seq3929 Length=3429 Score = 102 bits (112), Expect = 2e-19 Identities = 76/88 (86%), Gaps = 1/88 (1%) Strand=Plus/Minus Query 417 ATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATC 476 ||||||| ||||| ||||||| || | | ||| ||| ||||||||||||||||||| Sbjct 3429 ATGAGCCTTTCGCGGTTTCACCTTA-ATACGGCTCGAACTGAGACATGCATGGCTTAATC 3371 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| Sbjct 3370 TTTGAGACAAGCATATGACTACTGGCAG 3343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510001178880