Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1220 244 8e-60 seq9764 205 7e-48 >seq1220 Length=9943 Score = 244 bits (270), Expect = 8e-60 Identities = 608/916 (66%), Gaps = 23/916 (3%) Strand=Plus/Minus Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086 ||||| || | |||| ||||| || || || | ||||| || || ||| ||| Sbjct 8072 GAACCACTTCTTAAAGAAAATCCCAAACGATTTGTTGTTTTCCCAATAGAATATCCCGAT 8013 Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 |||||| | |||||| | || ||||| || || ||||| || || || ||||| Sbjct 8012 ATTTGGGCTAAATACAAACAAGCCGAAGCCTCGTTTTGGACAACCGAAGAAGTAGATTTA 7953 Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACA---ACATTTCATTAAA 61203 || | ||| || || | ||| | ||| | || ||| | |||||| || ||| Sbjct 7952 TCTAGAGATATAGATCATTGGAATAAATTAAC---CGATGACGAGAGACATTTTATCAAA 7896 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 | || ||||| || || || || || || || ||||| ||||| ||| | |||||||| Sbjct 7895 TACGTCTTGGCATTTTTCGCTGCATCCGATGGAATCGTTAATGAAAATCTGGTGGAACGT 7836 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 || || ||||| ||||| | || || || ||||| ||||| || || ||||| || Sbjct 7835 TTTAGTCAAGAGGTTCAAGTAACTGAAGCCCGGTGTTTTTACGGTTTTCAAATTGCAATT 7776 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383 |||||| | || || |||||||| | || || || ||||| ||||| || | | Sbjct 7775 GAGAATATTCATAGCGAAATGTACAGCATGCTTATTGAAACGTATATCAGCGACCCG--- 7719 Query 61384 GAACGTGAACGA----TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA-- 61437 || | ||| || || |||||||| || || || |||| || ||| ||| Sbjct 7718 -AAAGAGAAAGAATTTTTATTCAATGCGATAGAAACACTACCTTGCGT--AGCCAAAAAA 7662 Query 61438 GCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTG 61497 || | |||||| | | ||||||| ||||| | ||| || || ||||| || || | Sbjct 7661 GCTAACTGGGCCCTGCAATGGATCAGCAGTAAAGAGGCGACCTTCGGTGAGCGTTTAGTA 7602 Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || || || | ||||| || | || ||| ||| ||||| |||| ||||||||| Sbjct 7601 GCTTTCGCTGCAGTCGAAGGAATTTTCTTCTCCGGAAGCTTTGCTTCAATTTTTTGGTTG 7542 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 || || | ||||||||||| ||||| || ||| |||||| || ||||| ||||| || Sbjct 7541 AAAAAGAGAGGACTTATGCCGGGTCTAACTTTCTCCAATGAATTAATATCCCGCGATGAA 7482 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCG 61677 || |||||| ||| |||||| || |||| ||| | || | |||||| Sbjct 7481 GGATTGCATTATGAATTTGCTTGCTTATTATT---TTCTTATATTGTACAAAAACCGTCG 7425 Query 61678 GAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACT 61737 | || | | || ||| || | || ||||| ||||| || || ||||| || Sbjct 7424 AAATCTCGAATCGTCGATATTATTTGCGACGCGGTTGAAATCGAGCAAGAGTTTCTTACC 7365 Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797 || || ||||| || | || || ||||| || | ||| |||||||||||| Sbjct 7364 GATGCCTTGCCTGTTAGCTTAATAGGAATGAACTGCAAATCTATGAGTCAGTATATTGAA 7305 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCG-ATTTGGGTATGAAGCGGATCTATAATACGAAAAA 61856 ||||| || ||| | | ||| || | | || | |||| | | |||||| | | || Sbjct 7304 TTTGTCGCTGACAGATTATTGAACGAACTAGGTTGTGAAAAAG-TTTATAATTCAAGCAA 7246 Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACG 61916 ||||||||||| ||| | || || || ||| || || || || ||||| || ||| Sbjct 7245 TCCATTTGATTTTATGAATATCATATCCACGGAGGGTAAAACTAACTTTTTTGAAAAAAA 7186 Query 61917 TGTAGGCGACTATCAA 61932 || || || || ||| Sbjct 7185 AGTTGGAGAATACCAA 7170 >seq9764 Length=88291 Score = 205 bits (226), Expect = 7e-48 Identities = 362/528 (69%), Gaps = 0/528 (0%) Strand=Plus/Plus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 |||||| | || |||||||| ||||| || || | ||| | || || || || || Sbjct 25827 CATAAACAAGTCGGGTATCCAAAGGGCATAAAACAAATCCCTAGCACGCGCTTCTTCGAT 25886 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 |||| ||| || ||| | | ||| || ||||| ||||| ||||| || |||| ||| Sbjct 25887 GCCGGTATTCTTCTTCAAATTCAAGAAATCCAAGATATCGGCGTGCCAGGGCTCCAAGTA 25946 Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519 |||||||| | ||| | ||| |||||||| || ||||| || || ||| || Sbjct 25947 AATGGCGAAAGCTCCCGGCCTCTTGTTTCCACCTTGATCAACGTAACGCGCCGTATTATT 26006 Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGA 66579 ||| || | | |||||| || | ||||| ||| ||| || |||||| | || | Sbjct 26007 GAAAACCCTTAGCATCGGCACCAAACCGTTGGATACGCCGTTCGTGCCGGCAATATAAGT 26066 Query 66580 TCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGC 66639 |||| || | ||||| ||| || || | || ||||| ||||| | |||||| ||| Sbjct 26067 TCCTTTCGCTCTTATATTGTGCACGTTTACGCCGATACCGCCGGCTGACTTCGAAATGTA 26126 Query 66640 AGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAG 66699 || || | |||| ||| || || || || ||||| | || ||| ||| Sbjct 26127 GGCGCATTGCGCCAAGCAGGTGAAAATCCCCTCGATCGAGTCTTCGGGCATCATCAAGAG 26186 Query 66700 GTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTG 66759 | |||||||| ||| || ||||| ||||| || |||||||| || || || ||||||| Sbjct 26187 GAAGCATGAAGAAAGCTGAGGTTTTGGTGTAGCCGCCGAGAACAGAGTCGGACTAGCGTG 26246 Query 66760 CGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCC 66819 |||||| || || | ||||||||| || ||||| || ||||| || | |||||| Sbjct 26247 CGTAAAATATCTCTCCGATAGGTAATTGTAGGTTTCGATAACGGCATCGATATCTTCGCC 26306 Query 66820 ATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGAC 66867 || || || | || |||||||| | | |||||||| |||||| Sbjct 26307 GTGGATTCCAACAGCTACCCGCATCAGCATATGTTGAGGCCTTTCGAC 26354 Score = 134 bits (148), Expect = 1e-26 Identities = 418/638 (66%), Gaps = 32/638 (5%) Strand=Plus/Plus Query 65689 TCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAA 65748 ||| ||| ||| ||| | || ||| || | ||| | |||||| |||| | |||||||| Sbjct 25027 TCCTTCCACCTCGGCCAATTCACAACTAGCCTCCAAAGCGGCATAATACAACGTCTCGAA 25086 Query 65749 AATGCGTC-GATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAA 65807 ||| | | |||| | || || || ||||| || |||||||| | || || | || Sbjct 25087 AATCTGCAAGTTTAACATG-CGAGCTTCCTCGCTATCATACGGCATTCTCAACAAAATAA 25145 Query 65808 AAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTC 65867 ||| ||||| || || || | ||| |||||||| || | ||| | || ||| || ||| Sbjct 25146 AAGCATCGGCAAGGCCCTGTATTCCGATACCGATCGGTCTATGTCTCATATTCGA-CGTT 25204 Query 65868 TCGCCT-CAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACC 65926 | || | | |||| || || || || || || || || ||||| ||||| || || Sbjct 25205 TTGCTTTCGGGTATCGGATAATAGTTAATGTCTATGATCTTGTTCAAGTTGCGCGTGACG 25264 Query 65927 ACATGCACGATACGTCG--CAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGC 65984 | | | || ||| ||| | ||||||||| | || | ||| || | Sbjct 25265 ATTTTCGTGA--CGTTCTTCAAGTTTTCGAAATCGTACGTCTTC---CTATCCGGTTTTA 25319 Query 65985 CGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAG 66044 || ||| || | ||||| || || || || || || || || ||||| Sbjct 25320 CGAACATA------TTC---ACGGCAATCGACGCTAGATTACAAACTGCAATTTCGTCTT 25370 Query 66045 GAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCT 66104 | |||||||| || || |||||||| | || || | || || |||| |||| Sbjct 25371 TGGACGTATACTCTACGATCTCGGTGCATAAGTTGCTACTTTTGATCGTTCCCAGGTTCT 25430 Query 66105 GTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAA 66164 |||| || || || |||||||| || |||||||| | |||||| || || ||||| || | Sbjct 25431 GTTGGTTGCTTTTACGATTGCAAGCGTCCTTGTAGAGCATGTAAGGGGTACCGGTTTCCA 25490 Query 66165 CTTGGGACTCAATGATGGCGTGCCAAAG----AGCGCGTGCCTTCACCGTACGTACCGCC 66220 |||||| ||||||||||| |||| || | || | || ||||| Sbjct 25491 CTTGGGCGGCAATGATGGCGCGCCATAGTTGCTGAGCTGGAATTTGGGCGACGTA----- 25545 Query 66221 CTACCTTTGC--GTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGG 66278 | |||| | |||||| | ||||| |||| ||||| ||| ||||| |||| Sbjct 25546 -TTTCTTTCCTGATTCGTATTTCTCGTATAGGTTCTCGAATTCTTCGCCCCAGCAATCGG 25604 Query 66279 ACAGACATGGACACTTGTGTGGACACATCAGCGACCAA 66316 | || | ||||| | || ||||||||||| |||||| Sbjct 25605 AAAGTCCCGGACATTGATGCGGACACATCAGGGACCAA 25642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397440058269200