Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq1220 244 8e-60
seq9764 205 7e-48
>seq1220
Length=9943
Score = 244 bits (270), Expect = 8e-60
Identities = 608/916 (66%), Gaps = 23/916 (3%)
Strand=Plus/Minus
Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086
||||| || | |||| ||||| || || || | ||||| || || ||| |||
Sbjct 8072 GAACCACTTCTTAAAGAAAATCCCAAACGATTTGTTGTTTTCCCAATAGAATATCCCGAT 8013
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|||||| | |||||| | || ||||| || || ||||| || || || |||||
Sbjct 8012 ATTTGGGCTAAATACAAACAAGCCGAAGCCTCGTTTTGGACAACCGAAGAAGTAGATTTA 7953
Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACA---ACATTTCATTAAA 61203
|| | ||| || || | ||| | ||| | || ||| | |||||| || |||
Sbjct 7952 TCTAGAGATATAGATCATTGGAATAAATTAAC---CGATGACGAGAGACATTTTATCAAA 7896
Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263
| || ||||| || || || || || || || ||||| ||||| ||| | ||||||||
Sbjct 7895 TACGTCTTGGCATTTTTCGCTGCATCCGATGGAATCGTTAATGAAAATCTGGTGGAACGT 7836
Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323
|| || ||||| ||||| | || || || ||||| ||||| || || ||||| ||
Sbjct 7835 TTTAGTCAAGAGGTTCAAGTAACTGAAGCCCGGTGTTTTTACGGTTTTCAAATTGCAATT 7776
Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383
|||||| | || || |||||||| | || || || ||||| ||||| || | |
Sbjct 7775 GAGAATATTCATAGCGAAATGTACAGCATGCTTATTGAAACGTATATCAGCGACCCG--- 7719
Query 61384 GAACGTGAACGA----TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA-- 61437
|| | ||| || || |||||||| || || || |||| || ||| |||
Sbjct 7718 -AAAGAGAAAGAATTTTTATTCAATGCGATAGAAACACTACCTTGCGT--AGCCAAAAAA 7662
Query 61438 GCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTG 61497
|| | |||||| | | ||||||| ||||| | ||| || || ||||| || || |
Sbjct 7661 GCTAACTGGGCCCTGCAATGGATCAGCAGTAAAGAGGCGACCTTCGGTGAGCGTTTAGTA 7602
Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557
|| || || | ||||| || | || ||| ||| ||||| |||| |||||||||
Sbjct 7601 GCTTTCGCTGCAGTCGAAGGAATTTTCTTCTCCGGAAGCTTTGCTTCAATTTTTTGGTTG 7542
Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617
|| || | ||||||||||| ||||| || ||| |||||| || ||||| ||||| ||
Sbjct 7541 AAAAAGAGAGGACTTATGCCGGGTCTAACTTTCTCCAATGAATTAATATCCCGCGATGAA 7482
Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCG 61677
|| |||||| ||| |||||| || |||| ||| | || | ||||||
Sbjct 7481 GGATTGCATTATGAATTTGCTTGCTTATTATT---TTCTTATATTGTACAAAAACCGTCG 7425
Query 61678 GAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACT 61737
| || | | || ||| || | || ||||| ||||| || || ||||| ||
Sbjct 7424 AAATCTCGAATCGTCGATATTATTTGCGACGCGGTTGAAATCGAGCAAGAGTTTCTTACC 7365
Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797
|| || ||||| || | || || ||||| || | ||| ||||||||||||
Sbjct 7364 GATGCCTTGCCTGTTAGCTTAATAGGAATGAACTGCAAATCTATGAGTCAGTATATTGAA 7305
Query 61798 TTTGTTGCCGACCGTCTGTTGGTCG-ATTTGGGTATGAAGCGGATCTATAATACGAAAAA 61856
||||| || ||| | | ||| || | | || | |||| | | |||||| | | ||
Sbjct 7304 TTTGTCGCTGACAGATTATTGAACGAACTAGGTTGTGAAAAAG-TTTATAATTCAAGCAA 7246
Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACG 61916
||||||||||| ||| | || || || ||| || || || || ||||| || |||
Sbjct 7245 TCCATTTGATTTTATGAATATCATATCCACGGAGGGTAAAACTAACTTTTTTGAAAAAAA 7186
Query 61917 TGTAGGCGACTATCAA 61932
|| || || || |||
Sbjct 7185 AGTTGGAGAATACCAA 7170
>seq9764
Length=88291
Score = 205 bits (226), Expect = 7e-48
Identities = 362/528 (69%), Gaps = 0/528 (0%)
Strand=Plus/Plus
Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399
|||||| | || |||||||| ||||| || || | ||| | || || || || ||
Sbjct 25827 CATAAACAAGTCGGGTATCCAAAGGGCATAAAACAAATCCCTAGCACGCGCTTCTTCGAT 25886
Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459
|||| ||| || ||| | | ||| || ||||| ||||| ||||| || |||| |||
Sbjct 25887 GCCGGTATTCTTCTTCAAATTCAAGAAATCCAAGATATCGGCGTGCCAGGGCTCCAAGTA 25946
Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519
|||||||| | ||| | ||| |||||||| || ||||| || || ||| ||
Sbjct 25947 AATGGCGAAAGCTCCCGGCCTCTTGTTTCCACCTTGATCAACGTAACGCGCCGTATTATT 26006
Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGA 66579
||| || | | |||||| || | ||||| ||| ||| || |||||| | || |
Sbjct 26007 GAAAACCCTTAGCATCGGCACCAAACCGTTGGATACGCCGTTCGTGCCGGCAATATAAGT 26066
Query 66580 TCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGC 66639
|||| || | ||||| ||| || || | || ||||| ||||| | |||||| |||
Sbjct 26067 TCCTTTCGCTCTTATATTGTGCACGTTTACGCCGATACCGCCGGCTGACTTCGAAATGTA 26126
Query 66640 AGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAG 66699
|| || | |||| ||| || || || || ||||| | || ||| |||
Sbjct 26127 GGCGCATTGCGCCAAGCAGGTGAAAATCCCCTCGATCGAGTCTTCGGGCATCATCAAGAG 26186
Query 66700 GTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTG 66759
| |||||||| ||| || ||||| ||||| || |||||||| || || || |||||||
Sbjct 26187 GAAGCATGAAGAAAGCTGAGGTTTTGGTGTAGCCGCCGAGAACAGAGTCGGACTAGCGTG 26246
Query 66760 CGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCC 66819
|||||| || || | ||||||||| || ||||| || ||||| || | ||||||
Sbjct 26247 CGTAAAATATCTCTCCGATAGGTAATTGTAGGTTTCGATAACGGCATCGATATCTTCGCC 26306
Query 66820 ATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGAC 66867
|| || || | || |||||||| | | |||||||| ||||||
Sbjct 26307 GTGGATTCCAACAGCTACCCGCATCAGCATATGTTGAGGCCTTTCGAC 26354
Score = 134 bits (148), Expect = 1e-26
Identities = 418/638 (66%), Gaps = 32/638 (5%)
Strand=Plus/Plus
Query 65689 TCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAA 65748
||| ||| ||| ||| | || ||| || | ||| | |||||| |||| | ||||||||
Sbjct 25027 TCCTTCCACCTCGGCCAATTCACAACTAGCCTCCAAAGCGGCATAATACAACGTCTCGAA 25086
Query 65749 AATGCGTC-GATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAA 65807
||| | | |||| | || || || ||||| || |||||||| | || || | ||
Sbjct 25087 AATCTGCAAGTTTAACATG-CGAGCTTCCTCGCTATCATACGGCATTCTCAACAAAATAA 25145
Query 65808 AAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTC 65867
||| ||||| || || || | ||| |||||||| || | ||| | || ||| || |||
Sbjct 25146 AAGCATCGGCAAGGCCCTGTATTCCGATACCGATCGGTCTATGTCTCATATTCGA-CGTT 25204
Query 65868 TCGCCT-CAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACC 65926
| || | | |||| || || || || || || || || ||||| ||||| || ||
Sbjct 25205 TTGCTTTCGGGTATCGGATAATAGTTAATGTCTATGATCTTGTTCAAGTTGCGCGTGACG 25264
Query 65927 ACATGCACGATACGTCG--CAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGC 65984
| | | || ||| ||| | ||||||||| | || | ||| || |
Sbjct 25265 ATTTTCGTGA--CGTTCTTCAAGTTTTCGAAATCGTACGTCTTC---CTATCCGGTTTTA 25319
Query 65985 CGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAG 66044
|| ||| || | ||||| || || || || || || || || |||||
Sbjct 25320 CGAACATA------TTC---ACGGCAATCGACGCTAGATTACAAACTGCAATTTCGTCTT 25370
Query 66045 GAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCT 66104
| |||||||| || || |||||||| | || || | || || |||| ||||
Sbjct 25371 TGGACGTATACTCTACGATCTCGGTGCATAAGTTGCTACTTTTGATCGTTCCCAGGTTCT 25430
Query 66105 GTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAA 66164
|||| || || || |||||||| || |||||||| | |||||| || || ||||| || |
Sbjct 25431 GTTGGTTGCTTTTACGATTGCAAGCGTCCTTGTAGAGCATGTAAGGGGTACCGGTTTCCA 25490
Query 66165 CTTGGGACTCAATGATGGCGTGCCAAAG----AGCGCGTGCCTTCACCGTACGTACCGCC 66220
|||||| ||||||||||| |||| || | || | || |||||
Sbjct 25491 CTTGGGCGGCAATGATGGCGCGCCATAGTTGCTGAGCTGGAATTTGGGCGACGTA----- 25545
Query 66221 CTACCTTTGC--GTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGG 66278
| |||| | |||||| | ||||| |||| ||||| ||| ||||| ||||
Sbjct 25546 -TTTCTTTCCTGATTCGTATTTCTCGTATAGGTTCTCGAATTCTTCGCCCCAGCAATCGG 25604
Query 66279 ACAGACATGGACACTTGTGTGGACACATCAGCGACCAA 66316
| || | ||||| | || ||||||||||| ||||||
Sbjct 25605 AAAGTCCCGGACATTGATGCGGACACATCAGGGACCAA 25642
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397440058269200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |