Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2590 125 3e-26 seq324 98.7 4e-18 seq4278 91.5 6e-16 >seq2590 Length=53243 Score = 125 bits (138), Expect = 3e-26 Identities = 104/127 (82%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 |||||| | | ||||||||||||||||||||||||||||||| ||| |||| ||| Sbjct 3921 AGAGCACACACGCTGGGACCCGAAAGATGGTGAACTATGCCTGACCAGGATGAATTCAGG 3980 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 || ||||||| |||||| || | || ||||| ||||||||||||||||| | ||||| Sbjct 3981 GGGAACTCTGATGGAGGTCCGAAACGATTCTGACGTGCAAATCGATCGTCTGAGCTGGGT 4040 Query 674 ATAGGGG 680 ||||||| Sbjct 4041 ATAGGGG 4047 >seq324 Length=371709 Score = 98.7 bits (108), Expect = 4e-18 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 ||| ||| |||||||||||||||||| ||| ||| || ||| ||||| |||| || Sbjct 326524 TGGTACCGGAAAGATGGTGAACTATGTCTGGCCAGGACGATTTCAGGGGAAATTCTGATG 326465 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||| | | | || ||||| ||||||||||||||||| ||||||||||||||| Sbjct 326464 GAGGTTTGAAACGATTCTGACGTGCAAATCGATCGTCTGGGCTGGGTATAGGGGCGA 326408 >seq4278 Length=31515 Score = 91.5 bits (100), Expect = 6e-16 Identities = 89/115 (77%), Gaps = 6/115 (5%) Strand=Plus/Plus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||| ||||||||||||||||| ||| |||| ||| |||||||||| |||| Sbjct 26236 GGACCCGAAAAATGGTGAACTATGCCTGGCCAGGACGAAGTCAGGGGAAACTCTGATGGA 26295 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || | | | || ||||| ||||||| |||| | || |||||||||||| Sbjct 26296 GGTTTGTAACGATTCTGACGTGCAA------CGTCTGAGCTGTGTATAGGGGCGA 26344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079504826750