Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq8572 120 2e-22 >seq8572 Length=13345 Score = 120 bits (132), Expect = 2e-22 Identities = 517/803 (64%), Gaps = 36/803 (4%) Strand=Plus/Minus Query 65720 TCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATT--AAGTTCACGTGCCTCAT 65777 ||||| |||| |||||||||||||||||||||||||||||| || || | ||| | Sbjct 9019 TCGAGCGCGGTAAAATAAATGGTCTCGAAAATGCGTCGATTCAAACTT--TGAGCCGCCG 8962 Query 65778 CGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATAC 65837 | || || || ||||| | | | |||| ||||||||| |||||||| || || | Sbjct 8961 CACTTTCATATGGCATCGCGAGAGCGTAAAAAACGTCGGCCAGTCCTTGAACCCCGATCC 8902 Query 65838 CGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACA-GGGTAGTAATTGATA 65896 | || || || || ||||| ||||||| | | ||| | || || ||||||| | Sbjct 8901 CTATTGGGCGGTGTTTGCGATTGG-ACGTCTCACTTTCGGTGGATGGATAATAATTGAGA 8843 Query 65897 TCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAA 65956 |||||||| ||||||||||| || ||| || | || | || || Sbjct 8842 TCGATAATTTTGTTCAAATTGCGAACAACGACAGCGACTGTTTTTCTGAGCGACTCAAAG 8783 Query 65957 TCAAAATGTTTAGGACGATCGGGAGTGCCGGACA-CCACAAACTTGGGAAGGGCAAGAGA 66015 || |||||| || |||| || | || | |||||| || | || | || Sbjct 8782 TC-AAATGT-----AC-ATCGAGATT------CATCGACAAACCGCGGCAAAGCGATGGA 8736 Query 66016 TGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAG 66075 || | ||||| ||||| | || || | | ||| |||||||| |||| ||||| Sbjct 8735 CGCCAAATTGCAAACAGCAGTTTCCGATGGTGACGAATATTCGACAATCTCGGCGCACAA 8676 Query 66076 ATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTT 66135 ||| ||||| | || || ||||||| | ||||| ||| ||| || || ||||| Sbjct 8675 ATTGCTGCATTGAATCGTACCCAAATGTTTCTGATTGGATTTGTAATTACAAGCGTCCTT 8616 Query 66136 GTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGC 66195 ||| | | |||||| || || || | ||| | || | ||||| ||| || | Sbjct 8615 GTAAAGGACGTACGGTCCTCCCGTTTCTATTTGCGCATCGACAATGGCTCTCCAGAGGTC 8556 Query 66196 GCGTGCCTTCAC----CGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGT 66251 ||||| || || || ||||| || || || ||||| | | |||| || Sbjct 8555 TCGTGCATTTACTTTGCGAACGTAATTGCCGGCC---GC-CTCGTATTCTGCGTACTGGC 8500 Query 66252 GTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTG-TGTGGACACATCAGC 66310 |||| || | || ||| | | | | || | | | ||||| ||||| || Sbjct 8499 GTTCAAATTCGTTGCCGTATA-TGAGATGAAGCCCGGGCGATCGATGTGGGCACATGAGA 8441 Query 66311 GACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAG 66370 ||| | | | ||| || || ||||||| | || |||||||| |||||| Sbjct 8440 CTCCACATTTCGTTGTTTTCGACGCGCTTCATAAATTCGTTTGGAATCCAGAGAGCGTAG 8381 Query 66371 AAGAGATCGCGTGCTCG---TTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAAC 66427 || || ||||| || || ||| || | ||| |||||| | ||| || | Sbjct 8380 AACAGGTCGCGCGCCCGACTTTGTTCGGC---GCCAGTATTTTTTTTAAGGTCCAGAACG 8324 Query 66428 TCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCG 66487 ||||| |||||||| ||||| ||||| | ||| | ||| |||| |||| |||||| Sbjct 8323 TCAAAAATGTCGGCGTGCCACGGTTCGATGTACACGGCAAACGCGCCCGGTCGTTTGTTT 8264 Query 66488 CCACCTTGGTCGACGTAGCGAGC 66510 || ||||||||||| || || || Sbjct 8263 CCTCCTTGGTCGACATAACGGGC 8241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397456144864400