Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq30575 168 2e-39 seq59663 136 1e-29 seq30673 136 1e-29 seq12217 96.9 1e-17 seq24539 87.8 6e-15 seq9615 87.8 6e-15 seq37568 84.2 7e-14 >seq30575 Length=9917 Score = 168 bits (186), Expect = 2e-39 Identities = 111/123 (90%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 250 TACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTT 309 ||||||||||| ||| | |||| | | ||||||||||||||||||||||||||||||| Sbjct 823 TACACCTCTCATGTCTCCTTACAATGCCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTT 764 Query 310 CCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG 369 ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 763 TCCCGCTGATTCACCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTATATAGGG 704 Query 370 ACA 372 ||| Sbjct 703 ACA 701 >seq59663 Length=484 Score = 136 bits (150), Expect = 1e-29 Identities = 77/78 (99%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 270 AGAGAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 329 Query 415 TGACGAGGCATTTGGCTA 432 |||||||||||||||||| Sbjct 330 TGACGAGGCATTTGGCTA 347 >seq30673 Length=236 Score = 136 bits (150), Expect = 1e-29 Identities = 77/78 (99%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 57 AGAGAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 116 Query 415 TGACGAGGCATTTGGCTA 432 |||||||||||||||||| Sbjct 117 TGACGAGGCATTTGGCTA 134 >seq12217 Length=2525 Score = 96.9 bits (106), Expect = 1e-17 Identities = 74/88 (84%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 446 ATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGC 505 ||| ||||| ||||||||||||| | ||| ||||| ||||| | |||| |||||||| Sbjct 2118 ATAATTACTACCGCCGTTTACCCACACTTACTTGAAGTTCTTTAAGTTGATATTCAGAGT 2177 Query 506 ACTGGGCAGAAATCACATTGCGTCAACA 533 || |||||||||||||||||||||||| Sbjct 2178 TCTTGGCAGAAATCACATTGCGTCAACA 2205 >seq24539 Length=1786 Score = 87.8 bits (96), Expect = 6e-15 Identities = 48/48 (100%), Gaps = 0/48 (0%) Strand=Plus/Plus Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAAT 410 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1739 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAAT 1786 >seq9615 Length=269 Score = 87.8 bits (96), Expect = 6e-15 Identities = 48/48 (100%), Gaps = 0/48 (0%) Strand=Plus/Plus Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGC 401 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 222 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGC 269 >seq37568 Length=1001 Score = 84.2 bits (92), Expect = 7e-14 Identities = 46/46 (100%), Gaps = 0/46 (0%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTC 404 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 956 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTC 1001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634211194560