Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq34861 257 1e-63 seq39759 118 8e-22 >seq34861 Length=230841 Score = 257 bits (284), Expect = 1e-63 Identities = 1123/1763 (64%), Gaps = 39/1763 (2%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| ||||||||||| || |||||||| || | || | | | || ||||| || || Sbjct 60374 ATCAACCGTGAACTGAATTGCATTAGCGGCAGGTTTTATGCGCAAGTAATACATTCCCGT 60433 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTC 65196 || || || ||| ||||| || || ||||||| || || |||||||||| || Sbjct 60434 TTTCAGACCCATTTTCCATGCATAAAAGTGAATCGATGTCAACTTGCCATAATTCGGTTC 60493 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 |||||||| || || || || ||||| ||||| || | ||| | || |||||||| Sbjct 60494 AGCCACATGAATGTTAAAAGATTGACTTTGATCTATAAATGCACCTCTGTCAGCAGCCAT 60553 Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAAT 65316 | ||| | | || || ||||| || || || |||| | | | || | Sbjct 60554 TTTAATTGTTGTTTTAACAGAAATTTCCCAAACAGTTTTATACAATTGTCTAATATCCTT 60613 Query 65317 TGGAATCTCCTCAATGTCCTGGACTGAACCA-CGACGTGCAATAATGCGATTACGCATCG 65375 ||||||| |||||| | || | |||||| | || ||| || |||| ||| Sbjct 60614 TGGAATCCGCTCAATATTTTGAATAGAACCATTGTTATG-AATTATCTGATTCTTCATGT 60672 Query 65376 ACTCTGACCACAAACCCAAAT-CGATAAGATGTTGAACCAAGTGACGATTGATGACTTGG 65434 || ||| | | | | || ||| | | | | ||| ||| | || | ||||| Sbjct 60673 CTTCATCCCATAGATCTGCCTGCGTCAAG-TCTCGCAACAAATGATGGTTTACAACTTGA 60731 Query 65435 AACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCA 65494 || || || || | ||||| | || ||||| || || | |||||||| |||||| Sbjct 60732 AATTCTCCAGATAAAACACGTCTTTGGTAAATGTTTGATGTAAATGGTTCAAATGATTCA 60791 Query 65495 GTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTT 65554 | || || | ||||| || |||||||| || ||||| || || | || | ||| || Sbjct 60792 TTATTTCCCAAGATTTGTGCTGTAGATGCCGTGGGCATTGGGGCTAATAAAAGTGAATTG 60851 Query 65555 CGCAATCCGTTCATTT--CAATGTTGTGACGCAATTCGTCCCAGTTCCAC--ATCGGTTT 65610 || | ||| | |||| |||| || | || | ||||| |||| ||| || Sbjct 60852 CGAAGTCCAT--ATTTGGCAATTTTTTCCTTTAAAACAGTCCAGTCCCACAGATCAGT-- 60907 Query 65611 ATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACC 65670 | || | | ||||||||| | ||||| | | || || ||||| || Sbjct 60908 ----TGGAGTTTTA--TCCCACATATCATATTGCAAGATGCCCTGGCTTGCCGGACTTCC 60961 Query 65671 GAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGC 65730 || || || ||||| | | | || |||| || |||| || | ||| | Sbjct 60962 TTCATAAGTACTATAAACTCCATGTTTTTCCGCGAGTTCGCAACTGGCTTCTAATGCTCC 61021 Query 65731 AAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGG 65790 | || || || || || || || | ||||||| | ||| || || || || || || Sbjct 61022 GTAGTATATTGTTTCAAAGATTTGTTGGTTAAGTTTAATTGCGTCTTCACTTTCATATGG 61081 Query 65791 CATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATG 65850 || | ||| || ||||| || ||||| | |||||| ||||||||||| || || | || Sbjct 61082 AATGCGCATAAGTACAAATGTATCGGCTAAACCTTGCACTCCAATACCTATCGGTCTGTG 61141 Query 65851 ACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATT 65910 |||| || ||| | || || || || |||||||| || | ||| || || ||| Sbjct 61142 TCGCATGTTAGAATTCTTTGCTTCTGGCACTGGGTAGTAGTTAACATCAATGATTTTATT 61201 Query 65911 CAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTAGG 65970 | ||| |||| | | | || | ||||| || ||| | |||||| Sbjct 61202 TAGATTCTGTGTTATTGTCTTCGTGACTTCTTTCAATT-TTGTAAAATTATATGTTT--- 61257 Query 65971 ACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGAC 66030 ||| | | ||||| | | |||| || || | ||| ||||| Sbjct 61258 --TATCTTCATT---------AACAAATCTATTTAACGCAATTGAAGCCAAGTTACAGAC 61306 Query 66031 AGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTAT 66090 || | || || | | ||||| || |||||||| || |||| ||||||||| || Sbjct 61307 TGCAACTTCATCTGCTGAAGTATATTCAACAATTTCAGTACACAAATTACTGCATTTAAT 61366 Query 66091 GGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGG 66150 |||||| | ||| | ||||||||| || | ||| |||| ||| ||||||| |||||| || Sbjct 61367 GGTGCCAAGATTTTTTTGATTACTTTTTCTATTACATGAATCTTTGTACAGCATGTATGG 61426 Query 66151 AGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGT 66210 ||||| || || ||||| | ||| || || || | ||| || | | | || | | | Sbjct 61427 TGTGCCTGTTTCGACTTGTGCCTCTATTATTGCCTTCCACAGTTCTTGAG-CTCGAACTT 61485 Query 66211 ACGTACCGCCCTACCTTTGC-GTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCC 66269 | || || | | ||| | ||||||| | ||| || | ||| || ||| |||| Sbjct 61486 GCTTAACGAACCTCTTTTCCTGTTCGTATTTTTCATATAATGTTTCAAATTCTTCTCCCC 61545 Query 66270 ATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTT 66329 | |||| |||| || || | ||| || ||||| | ||| |||| | || Sbjct 61546 AACAGTCGGCAAGACCAGGGCAATCGTGAGGGCACATTAAACTCCACATTTCATCTTTTT 61605 Query 66330 CTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTT 66389 | ||||| |||||||| |||||| ||||| | || || || | || | ||||| | Sbjct 61606 CAACACGGTTCATAAATAAATCAGGAATCCATAAAGCATAAAATAATTCTCTTGCTCTTA 61665 Query 66390 GCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATG 66449 ||| || | || ||| || || || | |||||||| | || | |||||| | Sbjct 61666 CCTCTTCTTTACCAGTATTCTTTTTCAGATCTAAAAACTCAAAAACATCAGAATGCCAAG 61725 Query 66450 GTTCCAGGTAGATGGCGAACGAGCCCAT--ACGTTTGCCGCCACCTTGGTCGACGTAGCG 66507 |||| | ||| || ||||| ||||| | ||||| ||| |||||||| || || | Sbjct 61726 GTTCTAAGTAAATTGCGAA--AGCCCCTGGTCGTTTATTGCCTCCTTGGTCAACATACCT 61783 Query 66508 AGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 ||| ||| ||| | || | |||||| ||||| || || || || || || || || Sbjct 61784 AGCTGTATTATTGTACACTCTCAACATTGGTACAAGACCATTGGAAACTCCGTTAGTACC 61843 Query 66568 GTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGT 66627 | ||| || ||| || | ||| ||||||| | ||||||||||| || | Sbjct 61844 AGCTATGTAGGTACCTTTTGATCTGATACAATGAACATGTACTCCAATACCACCAGCTGA 61903 Query 66628 CTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTT 66687 || || || ||||| | | ||| |||| || |||||| ||| | || Sbjct 61904 TTTGGAAATTAATGCACATTGTTTTAATGTGTCATATATACCTTCAATGCTATCATCTTT 61963 Query 66688 GATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGT 66747 || | | |||| |||| ||| | ||| ||| | || || || || ||||| | || Sbjct 61964 CATTGCTATGAGGAAGCAAGAAGATAATTGCGGTCTTGGAGTTGCTGCAGAGAACAATGT 62023 Query 66748 GGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATC 66807 ||| | || || || || || | |||| | ||||| || || ||| | ||||| Sbjct 62024 GGGACTTGCATGAGTGAAATATTTTTCCGACAACAAGTTGTAGGTTTCTATGGCTGCATC 62083 Query 66808 AATGTTTTCGCCATGAATCCCGA 66830 ||||| ||| ||||| ||||||| Sbjct 62084 AATGTCTTCACCATGGATCCCGA 62106 >seq39759 Length=128263 Score = 118 bits (130), Expect = 8e-22 Identities = 137/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 61192 CATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAAT 61251 || || ||||||||||| ||||| || ||||| ||||| || ||||| || ||||| || Sbjct 66709 CACTTTATTAAACATGTATTGGCATTTTTTGCTGCTTCTGATGGTATAGTTAATGAAAAC 66768 Query 61252 TTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTC 61311 || ||||||| || | || || || ||| | || || | | || || || ||| Sbjct 66769 TTGGTGGAACGATTTTCACAAGAAGTTCAAATTGGTGAAGCAAGGTTCTTTTATGGATTC 66828 Query 61312 CAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATC 61371 || ||||| ||||||||||| ||||| ||||||||| | || || ||||| || ||| Sbjct 66829 CAAATTGCTATGGAGAATGTACACTCAGAGATGTACTCATTGCTGATTGATACTTATATC 66888 Query 61372 AGGGA 61376 ||||| Sbjct 66889 AGGGA 66893 Score = 113 bits (124), Expect = 4e-20 Identities = 100/125 (80%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086 ||||| || |||| || ||||| || |||||||| | ||||||||| | ||| ||| Sbjct 66026 GAACCACTCTTGCGTGAAAATCCGCGGCGTTTCGTCATCTTCCCCATCCAATATCCTGAT 66085 Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| ||||||||||| || |||||||| |||||||| |||||||| || ||||| Sbjct 66086 ATCTGGCAAATGTACAAAAAAGCTGAAGCTTCATTCTGGACAGTGGAGGAAGTGGATTTA 66145 Query 61147 TCCAA 61151 ||||| Sbjct 66146 TCCAA 66150 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/224 (70%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGC-CTTCAA 61454 || |||||||| || || || |||| || ||| || || || ||||| || ||| Sbjct 67112 TTATTCAATGCAATTGAAACTTTACCATGTGTAAAGAAAAAGGCAGACTGGGCACTGCAA 67171 Query 61455 TTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGA 61514 | |||| ||||| ||| || | ||||| ||||| | | || ||||| | || || Sbjct 67172 T-GGATTGGCAGTAAAACTGCAAACTTTGGGGAACGGATAGTTGCCTTTGCAGCTGTAGA 67230 Query 61515 GGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTAT 61574 || | || || ||| |||||| |||| || ||||||||||| || || | || Sbjct 67231 AGGAATCTTCTTTTCCGGAAGCTTTGCCTCAATATTCTGGTTGAAGAAGCGGGGCTTGAT 67290 Query 61575 GCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGG 61618 |||||||||||| |||||||||||| | || || | || |||| Sbjct 67291 GCCCGGTCTGACTTTCAGCAATGAGCTAATTTCTAGAGATGAGG 67334 Score = 93.3 bits (102), Expect = 3e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 61679 AGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTG 61738 ||||||||||| |||| | | || ||||| || || ||||| || |||| | Sbjct 68842 AGGAGCGTGTGCTGCAGATAATCAGGGATGCGGTGGTAATTGAGCAGGAGTTCTTGACCG 68901 Query 61739 ACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAAT 61798 |||| ||||||| ||| |||||||||| |||| ||||||||| ||||| ||||||| Sbjct 68902 ACGCGCTGCCCGTGCGACTGCTCGGCATGAACTGTGAACTAATGTCACAGTACATTGAAT 68961 Query 61799 TTGTTGCCGACCGTCTGTTGGTCGATTTG 61827 ||||||| ||| | || | || ||| || Sbjct 68962 TTGTTGCTGACAGGCTACTCGTAGATCTG 68990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397275001080800