Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq31034 212 9e-53 seq60948 102 1e-19 >seq31034 Length=2072735 Score = 212 bits (234), Expect = 9e-53 Identities = 186/226 (82%), Gaps = 7/226 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| | Sbjct 2065849 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTAGGAATT-C 2065906 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | | |||||||| | ||||||| ||||| | | |||||| | || Sbjct 2065907 CTCGTTTATGGGGGATAATTGCAAACCCCAATCCCCAGCACGAAGGAGTTTCAACGGGTT 2065966 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||| | ||||| || || || | ||| | | ||||||||||||||||||| Sbjct 2065967 GCCCGGGCCTCTAGGCCAGGGAGA---ACATGCTGATTCCTTCAGTGTAGCGCGCGTGCG 2066023 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||||| |||||||||||||||||||||||||||||| ||||| || Sbjct 2066024 GCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 2066068 >seq60948 Length=387 Score = 102 bits (112), Expect = 1e-19 Identities = 67/73 (92%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 153 TGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTT 212 ||| | | ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 148 TGATTCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTT 89 Query 213 ATTGCCTCAAACT 225 |||| ||||| || Sbjct 88 ATTG-CTCAATCT 77 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751539682705