Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20polytes_20[refseq_20GCF_5F000836215.1_202015-02-02] 3,874 sequences; 227,021,014 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1 152 9e-35 >seq1 Length=1179362 Score = 152 bits (168), Expect = 9e-35 Identities = 176/234 (75%), Gaps = 10/234 (4%) Strand=Plus/Minus Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC------TTTGCTCGAATACATTA 126 |||||||||||| ||||||||||| ||||||| ||| | |||| ||||| | Sbjct 18050 TTTTACTTTGAACAAATTAGAGTGCTCAAAGCGGGCTCAAAAGTGTGCTTGAATATTTCG 17991 Query 127 -GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC--CGCCG 183 |||||||||||||||||| || | |||||||||||||||||||| || || || | Sbjct 17990 TGCATGGAATAATAGAATATGATCT-CGGTTCTATTTTGTTGGTTTTCAGAACTCCGAGG 17932 Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243 |||||||||||||||||| | |||| | ||||| || |||||||||||||||| Sbjct 17931 TAATGATTAATAGGGATAACCTGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTTG 17872 Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAA 297 ||| ||||| ||| | ||||||| || |||| | ||||||||| || Sbjct 17871 GATCGTCGCAAGACGAACATCAACGAAAGCATTTGCCAAAGGTGTTTTCATCAA 17818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915164545152