Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Papilio_20polytes_20[refseq_20GCF_5F000836215.1_202015-02-02]
3,874 sequences; 227,021,014 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq1 239 1e-60
seq720 201 4e-49
>seq1
Length=1179362
Score = 239 bits (264), Expect = 1e-60
Identities = 137/140 (98%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338
|||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 11372 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCTGCTGATTCTCCCAAGCCCGTTCCCT 11431
Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 11432 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 11491
Query 399 CGCGTCACTAATTAGATGAC 418
||||||||||||||||||||
Sbjct 11492 CGCGTCACTAATTAGATGAC 11511
>seq720
Length=1047
Score = 201 bits (222), Expect = 4e-49
Identities = 293/415 (71%), Gaps = 62/415 (15%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||||||| || ||| ||||||| ||| |||| ||||||||||||||||||||
Sbjct 415 CTTTTGCTCCACGCGAGGTTTCTGTCCTCGCTGAGCTGGCCTTAGGACACCTGCGTTATT 356
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||| |||||||| ||||||||| |||||||||| |||| || |||| || | |||||||
Sbjct 355 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGGCAGTGTCCTCGAACCGGATC 296
Query 127 G-GC----------CCGCGAAGGACCTTAACGCCA------------------------- 150
|| | |||| || | || |||||
Sbjct 295 ACGCGGGAGTTGTACGGCGACGGGCGTTGCCGCCACGCCGCCACTCTGCACGCTTGGAAC 236
Query 151 GAAAA----TG-----GTCGGTGAA---GACCA-GTTCCGCTTC------ATTGATTAAG 191
|||| || | || |||| |||| | ||||||| | || ||||
Sbjct 235 GAAACACCGTGCGCCCGCCGATGAAATCGACCGCGCACCGCTTCCGCCCAACCGAGTAAG 176
Query 192 TaaaaaaaCGATAAGGGTAGTGGTATTTCA----CTTGCGC-CGAA-ACGG-CTCCCACT 244
||| |||| || | |||||||| ||||| | ||| |||| ||| ||||||||
Sbjct 175 TAATGAAACAATGAAAGTAGTGGTTTTTCAGCGACGACCGCGCGAACACGATCTCCCACT 116
Query 245 TATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304
||| |||||||||||| ||| | |||| | | ||||||||||||||||||||||||||
Sbjct 115 TATGCTACACCTCTCATGTCTCCTTACAATGCCAGACTAGAGTCAAGCTCAACAGGGTCT 56
Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 359
||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 55 TCTTTCCCCGCTGATTCTCCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635136652352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |