Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20polytes_20[refseq_20GCF_5F000836215.1_202015-02-02] 3,874 sequences; 227,021,014 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1 239 1e-60 seq720 201 4e-49 >seq1 Length=1179362 Score = 239 bits (264), Expect = 1e-60 Identities = 137/140 (98%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 11372 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCTGCTGATTCTCCCAAGCCCGTTCCCT 11431 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11432 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 11491 Query 399 CGCGTCACTAATTAGATGAC 418 |||||||||||||||||||| Sbjct 11492 CGCGTCACTAATTAGATGAC 11511 >seq720 Length=1047 Score = 201 bits (222), Expect = 4e-49 Identities = 293/415 (71%), Gaps = 62/415 (15%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||| || ||| ||||||| ||| |||| |||||||||||||||||||| Sbjct 415 CTTTTGCTCCACGCGAGGTTTCTGTCCTCGCTGAGCTGGCCTTAGGACACCTGCGTTATT 356 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| |||| || |||| || | ||||||| Sbjct 355 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGGCAGTGTCCTCGAACCGGATC 296 Query 127 G-GC----------CCGCGAAGGACCTTAACGCCA------------------------- 150 || | |||| || | || ||||| Sbjct 295 ACGCGGGAGTTGTACGGCGACGGGCGTTGCCGCCACGCCGCCACTCTGCACGCTTGGAAC 236 Query 151 GAAAA----TG-----GTCGGTGAA---GACCA-GTTCCGCTTC------ATTGATTAAG 191 |||| || | || |||| |||| | ||||||| | || |||| Sbjct 235 GAAACACCGTGCGCCCGCCGATGAAATCGACCGCGCACCGCTTCCGCCCAACCGAGTAAG 176 Query 192 TaaaaaaaCGATAAGGGTAGTGGTATTTCA----CTTGCGC-CGAA-ACGG-CTCCCACT 244 ||| |||| || | |||||||| ||||| | ||| |||| ||| |||||||| Sbjct 175 TAATGAAACAATGAAAGTAGTGGTTTTTCAGCGACGACCGCGCGAACACGATCTCCCACT 116 Query 245 TATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304 ||| |||||||||||| ||| | |||| | | |||||||||||||||||||||||||| Sbjct 115 TATGCTACACCTCTCATGTCTCCTTACAATGCCAGACTAGAGTCAAGCTCAACAGGGTCT 56 Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 359 ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 55 TCTTTCCCCGCTGATTCTCCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635136652352