Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20xuthus_20[refseq_20GCF_5F000836235.1_202015-02-02] 5,572 sequences; 243,890,167 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq2 325 1e-86 seq3496 232 2e-58 seq3110 232 2e-58 seq2069 232 2e-58 seq1205 232 2e-58 seq1078 232 2e-58 seq551 232 2e-58 seq5079 228 3e-57 seq4046 228 3e-57 seq3116 228 3e-57 seq1838 228 3e-57 seq1517 228 3e-57 seq1501 228 3e-57 seq1248 228 3e-57 seq2142 77.0 1e-11 >seq2 Length=41975 Score = 325 bits (360), Expect = 1e-86 Identities = 331/424 (78%), Gaps = 32/424 (8%) Strand=Plus/Minus Query 21 GAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTG 80 ||| ||||||| ||| |||| ||| |||||||||||||||| ||| ||||||| Sbjct 18394 GAGGTTTCTGTCCTCGCTGAGCTGGCCTCAGGACACCTGCGTTATTCTTTGGCAGATGTA 18335 Query 81 CCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGCGAAGGAC 140 ||||||||| |||||||||| |||| || |||| || | || |||| |||| ||| Sbjct 18334 CCGCCCCAGTCAAACTCCCCGCCTGGCAGTGTCCTCGAACCTGATCA---CGCG--GGAG 18280 Query 141 CTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTC----CGCTTCATTGATTAAGTaaaa 196 | ||| | | || || || | ||| | | || || | || | || Sbjct 18279 TTGTACGGCG----ACGGGCGTTGCCG-CCACGCCACCACTCTGCAC-GCTT--GGAACG 18228 Query 197 aaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGA-------AACGG-CTCCCACTTATT 248 |||| | |||||||| ||||| ||| ||| |||| ||||||||||| Sbjct 18227 AAAC----ACCGTAGTGGTTTTTCA---GCGACGACCGCGCGAACGATCTCCCACTTATG 18175 Query 249 CTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTT 308 |||||||||||| ||| | |||| | | |||||||||||||||||||||||||||||| Sbjct 18174 CTACACCTCTCATGTCTCCTTACAATGCCAGACTAGAGTCAAGCTCAACAGGGTCTTCTT 18115 Query 309 TCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGG 368 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 18114 TCCCCGCTGATTCTCCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGG 18055 Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 18054 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGGGGCATTTG 17995 Query 429 GCTA 432 |||| Sbjct 17994 GCTA 17991 >seq3496 Length=183194 Score = 232 bits (256), Expect = 2e-58 Identities = 168/189 (89%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGAT-TCCGCCAAGCCCGTTCCCT 338 |||||||| ||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct 138170 ACTAGAGTAAAGCTCAACAGGGTCTTCTTTCCCCGCTGATATATAACAAGCCCGTTCCCT 138229 Query 339 TGGCT-GTGGTTTCGC-TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCA 396 || || || | ||| | ||| | || ||||||||||| ||||||||||| |||||||| Sbjct 138230 TGTCTCGTTGCTTCACATAGCTC-TAAATAGGGACAGTAGGAATCTCGTTGCTCCATTCA 138288 Query 397 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 138289 TGCGCGTCACCAATTAAATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 138348 Query 457 CGCCGTTTA 465 ||||||||| Sbjct 138349 CGCCGTTTA 138357 >seq3110 Length=204583 Score = 232 bits (256), Expect = 2e-58 Identities = 168/189 (89%), Gaps = 4/189 (2%) Strand=Plus/Minus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGAT-TCCGCCAAGCCCGTTCCCT 338 |||||||| ||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct 187620 ACTAGAGTAAAGCTCAACAGGGTCTTCTTTCCCCGCTGATATATAACAAGCCCGTTCCCT 187561 Query 339 TGGCT-GTGGTTTCGC-TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCA 396 || || || | ||| | ||| | || ||||||||||| ||||||||||| |||||||| Sbjct 187560 TGTCTCGTTGCTTCACATAGCTC-TAAATAGGGACAGTAGGAATCTCGTTGCTCCATTCA 187502 Query 397 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 187501 TGCGCGTCACCAATTAAATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 187442 Query 457 CGCCGTTTA 465 ||||||||| Sbjct 187441 CGCCGTTTA 187433 >seq2069 Length=128212 Score = 232 bits (256), Expect = 2e-58 Identities = 168/189 (89%), Gaps = 4/189 (2%) Strand=Plus/Minus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGAT-TCCGCCAAGCCCGTTCCCT 338 |||||||| ||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct 103003 ACTAGAGTAAAGCTCAACAGGGTCTTCTTTCCCCGCTGATATATAACAAGCCCGTTCCCT 102944 Query 339 TGGCT-GTGGTTTCGC-TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCA 396 || || || | ||| | ||| | || ||||||||||| ||||||||||| |||||||| Sbjct 102943 TGTCTCGTTGCTTCACATAGCTC-TAAATAGGGACAGTAGGAATCTCGTTGCTCCATTCA 102885 Query 397 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 102884 TGCGCGTCACCAATTAAATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 102825 Query 457 CGCCGTTTA 465 ||||||||| Sbjct 102824 CGCCGTTTA 102816 >seq1205 Length=221829 Score = 232 bits (256), Expect = 2e-58 Identities = 168/189 (89%), Gaps = 4/189 (2%) Strand=Plus/Minus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGAT-TCCGCCAAGCCCGTTCCCT 338 |||||||| ||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct 105037 ACTAGAGTAAAGCTCAACAGGGTCTTCTTTCCCCGCTGATATATAACAAGCCCGTTCCCT 104978 Query 339 TGGCT-GTGGTTTCGC-TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCA 396 || || || | ||| | ||| | || ||||||||||| ||||||||||| |||||||| Sbjct 104977 TGTCTCGTTGCTTCACATAGCTC-TAAATAGGGACAGTAGGAATCTCGTTGCTCCATTCA 104919 Query 397 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 104918 TGCGCGTCACCAATTAAATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 104859 Query 457 CGCCGTTTA 465 ||||||||| Sbjct 104858 CGCCGTTTA 104850 >seq1078 Length=58595 Score = 232 bits (256), Expect = 2e-58 Identities = 168/189 (89%), Gaps = 4/189 (2%) Strand=Plus/Minus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGAT-TCCGCCAAGCCCGTTCCCT 338 |||||||| ||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct 14336 ACTAGAGTAAAGCTCAACAGGGTCTTCTTTCCCCGCTGATATATAACAAGCCCGTTCCCT 14277 Query 339 TGGCT-GTGGTTTCGC-TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCA 396 || || || | ||| | ||| | || ||||||||||| ||||||||||| |||||||| Sbjct 14276 TGTCTCGTTGCTTCACATAGCTC-TAAATAGGGACAGTAGGAATCTCGTTGCTCCATTCA 14218 Query 397 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 14217 TGCGCGTCACCAATTAAATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 14158 Query 457 CGCCGTTTA 465 ||||||||| Sbjct 14157 CGCCGTTTA 14149 >seq551 Length=118332 Score = 232 bits (256), Expect = 2e-58 Identities = 168/189 (89%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGAT-TCCGCCAAGCCCGTTCCCT 338 |||||||| ||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct 73167 ACTAGAGTAAAGCTCAACAGGGTCTTCTTTCCCCGCTGATATATAACAAGCCCGTTCCCT 73226 Query 339 TGGCT-GTGGTTTCGC-TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCA 396 || || || | ||| | ||| | || ||||||||||| ||||||||||| |||||||| Sbjct 73227 TGCCTCGTTGCTTCACATAGCTC-TAAATAGGGACAGTAGGAATCTCGTTGCTCCATTCA 73285 Query 397 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 73286 TGCGCGTCACCAATTAAATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 73345 Query 457 CGCCGTTTA 465 ||||||||| Sbjct 73346 CGCCGTTTA 73354 >seq5079 Length=337804 Score = 228 bits (252), Expect = 3e-57 Identities = 167/189 (88%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGC-CAAGCCCGTTCCCT 338 |||||||| ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 282840 ACTAGAGTAAAGCTCAACAGGGTCTTCTTTCCCCGCTGATAAATAACAAGCCCGTTCCCT 282899 Query 339 TGGCT-GTGGTTTCGC-TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCA 396 || || || | ||| | ||| | || ||||||||||| ||||||||||| |||||||| Sbjct 282900 TGTCTCGTTGCTTCACATAGCTC-TAAATAGGGACAGTAGGAATCTCGTTGCTCCATTCA 282958 Query 397 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 282959 TGCGCGTCACCAATTAAATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 283018 Query 457 CGCCGTTTA 465 ||||||||| Sbjct 283019 CGCCGTTTA 283027 >seq4046 Length=528848 Score = 228 bits (252), Expect = 3e-57 Identities = 167/189 (88%), Gaps = 4/189 (2%) Strand=Plus/Minus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGC-CAAGCCCGTTCCCT 338 |||||||| ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 340792 ACTAGAGTAAAGCTCAACAGGGTCTTCTTTCCCCGCTGATAAATAACAAGCCCGTTCCCT 340733 Query 339 TGGCT-GTGGTTTCGC-TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCA 396 || || || | ||| | ||| | || ||||||||||| ||||||||||| |||||||| Sbjct 340732 TGTCTCGTTGCTTCACATAGCTC-TAAATAGGGACAGTAGGAATCTCGTTGCTCCATTCA 340674 Query 397 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 340673 TGCGCGTCACCAATTAAATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 340614 Query 457 CGCCGTTTA 465 ||||||||| Sbjct 340613 CGCCGTTTA 340605 >seq3116 Length=171976 Score = 228 bits (252), Expect = 3e-57 Identities = 167/189 (88%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGC-CAAGCCCGTTCCCT 338 |||||||| ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 160881 ACTAGAGTAAAGCTCAACAGGGTCTTCTTTCCCCGCTGATAAATAACAAGCCCGTTCCCT 160940 Query 339 TGGCT-GTGGTTTCGC-TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCA 396 || || || | ||| | ||| | || ||||||||||| ||||||||||| |||||||| Sbjct 160941 TGTCTCGTTGCTTCACATAGCTC-TAAATAGGGACAGTAGGAATCTCGTTGCTCCATTCA 160999 Query 397 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 161000 TGCGCGTCACCAATTAAATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 161059 Query 457 CGCCGTTTA 465 ||||||||| Sbjct 161060 CGCCGTTTA 161068 >seq1838 Length=309293 Score = 228 bits (252), Expect = 3e-57 Identities = 167/189 (88%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGC-CAAGCCCGTTCCCT 338 |||||||| ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 182016 ACTAGAGTAAAGCTCAACAGGGTCTTCTTTCCCCGCTGATAAATAACAAGCCCGTTCCCT 182075 Query 339 TGGCT-GTGGTTTCGC-TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCA 396 || || || | ||| | ||| | || ||||||||||| ||||||||||| |||||||| Sbjct 182076 TGTCTCGTTGCTTCACATAGCTC-TAAATAGGGACAGTAGGAATCTCGTTGCTCCATTCA 182134 Query 397 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 182135 TGCGCGTCACCAATTAAATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 182194 Query 457 CGCCGTTTA 465 ||||||||| Sbjct 182195 CGCCGTTTA 182203 >seq1517 Length=354486 Score = 228 bits (252), Expect = 3e-57 Identities = 167/189 (88%), Gaps = 4/189 (2%) Strand=Plus/Minus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGC-CAAGCCCGTTCCCT 338 |||||||| ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 221357 ACTAGAGTAAAGCTCAACAGGGTCTTCTTTCCCCGCTGATAAATAACAAGCCCGTTCCCT 221298 Query 339 TGGCT-GTGGTTTCGC-TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCA 396 || || || | ||| | ||| | || ||||||||||| ||||||||||| |||||||| Sbjct 221297 TGTCTCGTTGCTTCACATAGCTC-TAAATAGGGACAGTAGGAATCTCGTTGCTCCATTCA 221239 Query 397 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 221238 TGCGCGTCACCAATTAAATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 221179 Query 457 CGCCGTTTA 465 ||||||||| Sbjct 221178 CGCCGTTTA 221170 >seq1501 Length=94110 Score = 228 bits (252), Expect = 3e-57 Identities = 167/189 (88%), Gaps = 4/189 (2%) Strand=Plus/Minus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGC-CAAGCCCGTTCCCT 338 |||||||| ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 59384 ACTAGAGTAAAGCTCAACAGGGTCTTCTTTCCCCGCTGATAAATAACAAGCCCGTTCCCT 59325 Query 339 TGGCT-GTGGTTTCGC-TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCA 396 || || || | ||| | ||| | || ||||||||||| ||||||||||| |||||||| Sbjct 59324 TGTCTCGTTGCTTCACATAGCTC-TAAATAGGGACAGTAGGAATCTCGTTGCTCCATTCA 59266 Query 397 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 59265 TGCGCGTCACCAATTAAATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 59206 Query 457 CGCCGTTTA 465 ||||||||| Sbjct 59205 CGCCGTTTA 59197 >seq1248 Length=515940 Score = 228 bits (252), Expect = 3e-57 Identities = 167/189 (88%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGC-CAAGCCCGTTCCCT 338 |||||||| ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 343955 ACTAGAGTAAAGCTCAACAGGGTCTTCTTTCCCCGCTGATAAATAACAAGCCCGTTCCCT 344014 Query 339 TGGCT-GTGGTTTCGC-TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCA 396 || || || | ||| | ||| | || ||||||||||| ||||||||||| |||||||| Sbjct 344015 TGTCTCGTTGCTTCACATAGCTC-TAAATAGGGACAGTAGGAATCTCGTTGCTCCATTCA 344073 Query 397 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 344074 TGCGCGTCACCAATTAAATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 344133 Query 457 CGCCGTTTA 465 ||||||||| Sbjct 344134 CGCCGTTTA 344142 >seq2142 Length=1327 Score = 77.0 bits (84), Expect = 1e-11 Identities = 55/62 (89%), Gaps = 1/62 (2%) Strand=Plus/Plus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGAT-TCCGCCAAGCCCGTTCCCT 338 |||||||| ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1264 ACTAGAGTAAAGCTCAACAGGGTCTTCTTTCCCCGCTGATAAATAACAAGCCCGTTCCCT 1323 Query 339 TG 340 || Sbjct 1324 TG 1325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635108886656