Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20xuthus_20[refseq_20GCF_5F000836235.1_202015-02-02] 5,572 sequences; 243,890,167 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq1248 84.2 8e-11 seq1205 84.2 8e-11 >seq1248 Length=515940 Score = 84.2 bits (92), Expect = 8e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 364424 CCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCG 364483 || || ||||| | | ||||| | |||| || || || || ||||| || || || Sbjct 297813 CCTATTGTCATTCTACTAGGAATAGCATGAGGATTAATAATAATATCAGGGACTATCCCT 297872 Query 364484 TCAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCA 364543 |||| ||||||||||||||||| |||| | | | |||||||| |||||||| ||| Sbjct 297873 TCAGAAGTAAAGGGCATATCTTCTTGAGGGAGTGTAATCCCAATGGTCCCCTTTTGAGCA 297932 Query 364544 TAGCGAGAAGCAAACTTGTCGCCAAT 364569 | | ||||||||| || || || || Sbjct 297933 TGTCTAGAAGCAAATTTATCTCCCAT 297958 >seq1205 Length=221829 Score = 84.2 bits (92), Expect = 8e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 364424 CCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCG 364483 || || ||||| | | ||||| | |||| || || || || ||||| || || || Sbjct 147753 CCTATTGTCATTCTACTAGGAATAGCATGAGGATTAATAATAATATCAGGGACTATCCCT 147694 Query 364484 TCAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCA 364543 |||| ||||||||||||||||| |||| | | | |||||||| |||||||| ||| Sbjct 147693 TCAGAAGTAAAGGGCATATCTTCTTGAGGGAGTGTAATCCCAATGGTCCCCTTTTGAGCA 147634 Query 364544 TAGCGAGAAGCAAACTTGTCGCCAAT 364569 | | ||||||||| || || || || Sbjct 147633 TGTCTAGAAGCAAATTTATCTCCCAT 147608 Score = 84.2 bits (92), Expect = 8e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 364424 CCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCG 364483 || || ||||| | | ||||| | |||| || || || || ||||| || || || Sbjct 153154 CCTATTGTCATTCTACTAGGAATAGCATGAGGATTAATAATAATATCAGGGACTATCCCT 153095 Query 364484 TCAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCA 364543 |||| ||||||||||||||||| |||| | | | |||||||| |||||||| ||| Sbjct 153094 TCAGAAGTAAAGGGCATATCTTCTTGAGGGAGTGTAATCCCAATGGTCCCCTTTTGAGCA 153035 Query 364544 TAGCGAGAAGCAAACTTGTCGCCAAT 364569 | | ||||||||| || || || || Sbjct 153034 TGTCTAGAAGCAAATTTATCTCCCAT 153009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884751835603796