Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccus_20marginatus_20[genbank_20GCA_5F900065295.1_202016-03-26] 60,102 sequences; 191,208,351 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq20513 141 4e-31 seq40205 84.2 9e-14 >seq20513 Length=9887 Score = 141 bits (156), Expect = 4e-31 Identities = 131/161 (81%), Gaps = 4/161 (2%) Strand=Plus/Minus Query 24 GTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATT 83 ||||| || |||| | |||||| |||| ||| || |||||| |||| ||| |||||| | Sbjct 5057 GTGAA-CTGCTTCTAAGAGTCGGGTTGCTTGAGAGTGCAGCCCTAAGAGGGTGGTAAACT 4999 Query 84 TCTTCTAAAGCTA-AATATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAG 141 | ||||| |||| ||||| | ||| ||||||||||||| ||||||| |||| ||||| Sbjct 4998 CCATCTAAGGCTACAATAT-GACCACGAGACCGATAGCGGACAAGTACCGTGAGGGAAAG 4940 Query 142 ATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAA 182 ||||||| |||||| | |||||||||||||| |||||||| Sbjct 4939 TTGAAAAGAACTTTGAAGAGAGAGTTAAAAAGTACGTGAAA 4899 Score = 127 bits (140), Expect = 9e-27 Identities = 100/120 (83%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||||| |||||||||||||||||||||||| | ||| ||||| ||| |||||| ||| Sbjct 4303 TGTTGGTACCCGAAAGATGGTGAACTATGCCCGGCCAGGATGAAGTCAGGGGAAACCCTG 4244 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||| || || ||||||| |||||||||||||||| | ||||||||||||||| Sbjct 4243 ATGGAGGTCCGAAGTGGTTCTGACGTGCAAATCGATCGTATGAGCTGGGTATAGGGGCGA 4184 >seq40205 Length=2120 Score = 84.2 bits (92), Expect = 9e-14 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 600 AGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGAT 659 ||| ||||| ||| |||||| ||| |||||| || || ||||||| ||||||||||||| Sbjct 782 AGGATGAAGTCAGGGGAAACCCTGATGGAGGTCCGAAGTGGTTCTGACGTGCAAATCGAT 841 Query 660 CGTCAAATTTGGGTATAGGGGCGA 683 ||| | ||||||||||||||| Sbjct 842 CGTATGAGCTGGGTATAGGGGCGA 865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2078710812100