Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccus_20marginatus_20[genbank_20GCA_5F900065295.1_202016-03-26] 60,102 sequences; 191,208,351 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq20513 360 6e-97 >seq20513 Length=9887 Score = 360 bits (398), Expect = 6e-97 Identities = 262/300 (87%), Gaps = 3/300 (1%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCT-CAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCA 295 ||||||||||| ||||||| | || ||| |||| | | |||| |||||||||||| Sbjct 2034 CTCCCACTTATGCTACACCCCGGCATGTCTCCGAACAATGCCAGACTGGAGTCAAGCTCA 2093 Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355 ||||||||||||||||||||| | |||||||||||||||||||||||||||||| | Sbjct 2094 ACAGGGTCTTCTTTCCCCGCTTTCTTTTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCGA 2153 Query 356 GATAGTAGATAGGGACAGTGG-GAATCT-CGTTAATCCATTCATGCGCGTCACTAATTAG 413 ||| ||||||| | | ||||| ||||||||||||||||||||||||||||||| Sbjct 2154 TGGCGTAAGCAGGGACAATTGAGAATCAACGTTAATCCATTCATGCGCGTCACTAATTAG 2213 Query 414 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 473 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct 2214 ATGACGAGGCATTTGGCTACCTTAAAAGAGTCATAGTTACTCCTGCCGTTTACCCGCGCT 2273 Query 474 TGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 || |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct 2274 TGCTTGAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 2333 Score = 116 bits (128), Expect = 1e-23 Identities = 97/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||||| ||| |||| || ||| |||| |||||||||||||||||||| Sbjct 1583 CTTTTGCTCTACATGAGGTTTCCGTCCTCATTGAGCTGGCCTTAGGACACCTGCGTTATT 1642 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGAT 125 ||| |||||||| ||||||||| ||||||||||||||| | |||| || | ||||| Sbjct 1643 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCCACCTGGCGGTGTCCTCGAATCGGAT 1701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634217212096