Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccus_20marginatus_20[genbank_20GCA_5F900065295.1_202016-03-26] 60,102 sequences; 191,208,351 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq20513 300 5e-79 >seq20513 Length=9887 Score = 300 bits (332), Expect = 5e-79 Identities = 237/282 (84%), Gaps = 3/282 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| || || |||| ||| || ||||| ||||| | ||||||||| Sbjct 8247 GTACTCATTCCGATTACGAGGCCTCAAATGAGTCCCGTATCGTTATTTTTCGTCACTACC 8306 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8307 TCCCCGAGCTGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 8366 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||| Sbjct 8367 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACCACCACGGT 8426 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | | |||||| |||| |||||||| |||||| ||||||| || | ||||||| Sbjct 8427 AGGCGTCGAACCTACCGTCGACAGTTGATAAGGCAGACATTTGAAAGATACGTCGCCGGT 8486 Query 240 TCAAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCAA 279 | || || |||||| | | |||||||| || ||||||| Sbjct 8487 ACGAGACCGTGCGATCAGCTCGAAGTTATTCAGAGTCACCAA 8528 Score = 196 bits (216), Expect = 1e-47 Identities = 144/164 (88%), Gaps = 4/164 (2%) Strand=Plus/Plus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAA 401 |||||||||||||||||||||||||| |||||||| ||| || ||||| ||| || | Sbjct 8652 GCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACGTG-GGTACAATCTAAGGA 8710 Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTTATACTTAGA 460 || ||||||||||||||||||| ||||| ||||||| ||| |||| |||| ||| ||| Sbjct 8711 ACCATAACTGATTTAATGAGCCTTTCGCGGTTTCACCGTACTAGACGGCTTGCACTGAGA 8770 Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 8771 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 8814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509492219392