Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq14591 93.3 4e-17 seq11687 75.2 1e-11 seq13390 73.4 4e-11 >seq14591 Length=813827 Score = 93.3 bits (102), Expect = 4e-17 Identities = 131/183 (72%), Gaps = 7/183 (4%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC------CTTTGCTCGAATACAT 63 || ||||||||||| ||||||||| | | ||||||||| || ||| ||||| Sbjct 813084 ACGTTTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCAAAAATCTCTGCCAGAATAGTG 813025 Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG 123 ||||||||||| ||| ||||| | ||||||||| ||| ||| || | || | Sbjct 813024 GTGCATGGAATAATGGAACAGGACCTT-GGTTCTATTCTGTTGGTCTCCGGAACACAAGG 812966 Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 ||||||| ||| ||| || |||||| | ||||| || | |||||||||||||| Sbjct 812965 TAATGATCAATGTGGACAGGCGGGGGCATTCGTATTGCGGCGTTAGAGGTGAAATTCTTG 812906 Query 184 GAT 186 ||| Sbjct 812905 GAT 812903 >seq11687 Length=79703 Score = 75.2 bits (82), Expect = 1e-11 Identities = 78/100 (78%), Gaps = 2/100 (2%) Strand=Plus/Minus Query 12 TTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATACATTACCATG 70 ||||||||||| |||||||||| | ||||| || || | || ||||| |||| Sbjct 69733 TTTTACTTTGAGAAAATTAGAGTGCTCAAAACATGCGTGACGCATGAATAATGGTGCATG 69674 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 ||||||| ||||| ||| | |||||||||||||| ||||| Sbjct 69673 GAATAATGGAATACGACCT-CGGTTCTATTTTGTTGGTTT 69635 >seq13390 Length=1640224 Score = 73.4 bits (80), Expect = 4e-11 Identities = 122/175 (70%), Gaps = 10/175 (6%) Strand=Plus/Plus Query 12 TTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATACATTACCATG 70 |||||||||||||||||||||| | ||||| || || | || ||||| | || Sbjct 250254 TTTTACTTTGAAAAAATTAGAGTGCTCAAACCATGCGTGACGCATGAATAATAGTGCTTG 250313 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130 |||||| ||| | |||||||||||||| ||||| | | || |||||||| Sbjct 250314 GAATAA--------GACCT-CGGTTCTATTTTGTTGGTTTTTGGAACACGAGGTAATGAT 250364 Query 131 AAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 || | ||| || |||||| | ||||| | | |||||||||||||||| Sbjct 250365 TAAGAGGGACAGACGGGGGCATTCGTATTGCGACGCTAGAGGTGAAATTCTTGGA 250419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511917996320