Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq14591 288 3e-75 seq3375 136 1e-29 seq14589 109 2e-21 seq12797 87.8 5e-15 seq14132 77.0 1e-11 >seq14591 Length=813827 Score = 288 bits (318), Expect = 3e-75 Identities = 341/454 (75%), Gaps = 20/454 (4%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAA--GAGCCCTGTATCAGTATTTATTGTCACTAC 58 ||||||||||| ||||| || || | | ||| || ||||| ||||| |||||||||| Sbjct 813377 GTACTCATTCCGATTACGAGGCCTCATATCGAGTCCCGTATCGTTATTTTTTGTCACTAC 813436 Query 59 CTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118 |||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct 813437 CTCCCCGTTCCGGGAGTGGGTAATTTGCGTGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 813496 Query 119 TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGG 178 |||||||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct 813497 TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTAACAGCCATGG 813556 Query 179 TAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238 ||| | | ||||||||| |||||||| | ||| ||||||| || ||||||| Sbjct 813557 TAGACACAGAGTCTACCATCGTCAGTTGATAAGTCAGGCATTTGAAAGATAAGTCGCCGG 813616 Query 239 CTC-AAGGCCATGCGATTCGTTAAGTTAT-TA--TGAATCACCAAGGAGCCCCGAAGGGC 294 | || ||||||||| | | ||||| || | ||| | |||| || ||| Sbjct 813617 TACGGAGACCATGCGATCTGCTGTGTTATCTAGGTTCCTCAACTTAACGCCCGGACTGGC 813676 Query 295 GTTGGTTTTTTATCTAATAAATACACCCCTTC--CGAA--GTC-GGGGTTTTTAGCATGT 349 |||| ||||| ||| | ||| | |||| ||| || || | |||||| Sbjct 813677 CTTGG-------TCTAACAAAAGCGCCCTGACCACGAATGGTCACGGCTTGGTTGCATGT 813729 Query 350 ATTAGCTCTAGAATTACCACGGTTATCCATG--TAGTAAGGTACTATCAAATAAACGATA 407 |||||||||||||||||||| |||||||| | ||| | || || | |||| | | Sbjct 813730 ATTAGCTCTAGAATTACCACAGTTATCCAAGCACAGTCAAGTTAACTCTAGTAAATTAAA 813789 Query 408 ACTGATTTAATGAGCCATTCGCAGTTTCACTGTA 441 |||| |||| |||||| || || |||||||| || Sbjct 813790 ACTGGTTTACTGAGCCTTTTGCGGTTTCACTTTA 813823 >seq3375 Length=12126510 Score = 136 bits (150), Expect = 1e-29 Identities = 106/125 (85%), Gaps = 1/125 (1%) Strand=Plus/Minus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAAC 403 ||||||||||||||||||||| |||| |||||||| |||||||||||| ||| || ||| Sbjct 1996676 GCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAGTAAGGTACGATCCAAGGAAC 1996617 Query 404 GATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACAT 463 ||||||||||||||||||||||||| || || | || | | || | ||||||||||| Sbjct 1996616 CATAACTGATTTAATGAGCCATTCGCGGTCTCGCCTTA-ATACGGCATGTACTTAGACAT 1996558 Query 464 GCATG 468 ||||| Sbjct 1996557 GCATG 1996553 >seq14589 Length=11651882 Score = 109 bits (120), Expect = 2e-21 Identities = 114/147 (78%), Gaps = 6/147 (4%) Strand=Plus/Plus Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTAT-CAAATAAACG-ATAACT 410 |||||||||||| |||| ||||| ||||| | |||| || |||| | | |||||| Sbjct 8787289 AGCTCTAGAATTGCCACAGTTATGAGAGTAGTGAAGTACAATACAAAGTACCATATAACT 8787348 Query 411 GATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGC 470 ||||||||||| ||||| |||||||| || | || || | ||||| || || | | Sbjct 8787349 AATTTAATGAGCTATTCGTGGTTTCACTTTAAATATGGCATGTACTTCGA----CAAGAC 8787404 Query 471 TTAATCTTTGAGACAAGCATATGACTA 497 |||||||||||| |||||||||||||| Sbjct 8787405 TTAATCTTTGAGGCAAGCATATGACTA 8787431 Score = 100 bits (110), Expect = 9e-19 Identities = 100/130 (77%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 29 GAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGC 88 ||| ||||||| ||||| | |||| |||||| || | | | |||||||||| Sbjct 2418502 GAGTCCTGTATTGCTATTTTTCGTCAATACCTCATCGAGAAAGAAGCGGGTAATTTGTCT 2418443 Query 89 GCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACC 148 ||||||||||| | |||||||||||||| |||| ||||||||||||||| || |||| Sbjct 2418442 GCCTGCTGCCTCCTTTGGATGTGGTAGCTGTTTTTCAGGCTCCCTCTCCAAAACTGAACT 2418383 Query 149 CTAATTCCCC 158 | ||||||| Sbjct 2418382 CAGATTCCCC 2418373 Score = 100 bits (110), Expect = 9e-19 Identities = 100/130 (77%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 29 GAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGC 88 ||| ||||||| ||||| | |||| |||||| || | | | |||||||||| Sbjct 2451136 GAGTCCTGTATTGCTATTTTTCGTCAATACCTCATCGAGAAAGAAGCGGGTAATTTGTCT 2451077 Query 89 GCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACC 148 ||||||||||| | |||||||||||||| |||| ||||||||||||||| || |||| Sbjct 2451076 GCCTGCTGCCTCCTTTGGATGTGGTAGCTGTTTTTCAGGCTCCCTCTCCAAAACTGAACT 2451017 Query 149 CTAATTCCCC 158 | ||||||| Sbjct 2451016 CAGATTCCCC 2451007 >seq12797 Length=7776119 Score = 87.8 bits (96), Expect = 5e-15 Identities = 65/75 (87%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 430 AGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCA 489 |||||||| || | | || | |||||| |||||||||| ||||||||||||||||||| Sbjct 1081688 AGTTTCACCTTA-ATACGGCATGTACTTAAACATGCATGGTTTAATCTTTGAGACAAGCA 1081746 Query 490 TATGACTACTGGCAG 504 ||||||||||||||| Sbjct 1081747 TATGACTACTGGCAG 1081761 >seq14132 Length=3490257 Score = 77.0 bits (84), Expect = 1e-11 Identities = 44/45 (98%), Gaps = 0/45 (0%) Strand=Plus/Minus Query 460 ACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 917922 ACATGGATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 917878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510150285568