Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq546 114 1e-20 seq14474 91.5 1e-13 seq16166 86.0 5e-12 >seq546 Length=398126 Score = 114 bits (126), Expect = 1e-20 Identities = 150/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 61397 TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATT 61456 |||||||||| ||||| || | || || || |||| ||||| ||||| | || | Sbjct 248535 TGTTCAATGCGATCGAAACTTTGCCCTGTGTTAAAAGGAAGGCGGACTGGGCGCTGAACT 248594 Query 61457 GGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGG 61516 |||||| || || | ||| | ||||| ||| || | | |||||||| | || || | Sbjct 248595 GGATCAGTAGCACGAATGCTTCCTTTGGAGAAAGAGTTGTTGCATTTGCAGCCGTGGAAG 248654 Query 61517 GTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGC 61576 | |||||||| ||| || ||||| | || || ||||||||||| | || ||||||| Sbjct 248655 GCATATTTTTCTCTGGCTCCTTTGCATCTATTTTCTGGTTGAAGAAGAGAGGTCTTATGC 248714 Query 61577 CCGGTCTGACCTTCAGCAATGAGTTGAT 61604 | ||||| || ||||| ||||| || || Sbjct 248715 CTGGTCTCACATTCAGTAATGAATTAAT 248742 >seq14474 Length=2471489 Score = 91.5 bits (100), Expect = 1e-13 Identities = 114/154 (74%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 65701 GGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATT 65760 ||| |||| |||||| | ||| | |||||||||||||||||| || |||||| | ||| Sbjct 1674048 GGCTAGTTCACAGCTAGCCTCTAATGCGGCAAAATAAATGGTTTCAAAAATGTCTGCATT 1674107 Query 65761 AAGTTCACGTGCCTCATCGCTCTCGTACGGCATA-CCCATCAGGACAAAAGTGTCGGCCA 65819 || | | || || || || || | || ||| | |||||| | ||||| || || | Sbjct 1674108 TAGCTTTTGAGCTTCTTCACTATCAAATGG-ATATCTCATCAGAATAAAAGCATCCGCTA 1674166 Query 65820 GACCTTGAACTCCAATACCGATGGGACGATGACG 65853 |||||||||||| || || ||||| | |||||| Sbjct 1674167 AACCTTGAACTCCTATTCCAATGGGCCTATGACG 1674200 Score = 89.7 bits (98), Expect = 4e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 67067 TTGTGCATGTTGGAGATGGCGATACGGGCGGCCAGGACACCATAATCGGGATGTAGAGTC 67126 ||||||| |||||||| || || || || || || | | |||| || ||||| || Sbjct 1721272 TTGTGCAGATTGGAGATAGCAATTCGAGCAGCTAGAATAGCATAGTCTGGATGCTTTGTA 1721331 Query 67127 ATCATACTGGCGGCAGTTTCAGCGGCCAAGGTATCAAGTTCAGCGGTAGTCACACCAGGA 67186 ||||| | || ||| ||||||| || | | |||| |||||| | ||||| ||||||||| Sbjct 1721332 GTCATAGTAGCAGCAATTTCAGCAGCTAGGTTATCTAGTTCAACTGTAGTGACACCAGGA 1721391 Query 67187 TACAGGCCA 67195 |||| |||| Sbjct 1721392 TACAAGCCA 1721400 Score = 86.0 bits (94), Expect = 5e-12 Identities = 110/149 (74%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 66321 CATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGC 66380 |||||| ||| || | ||||||||| |||||||||||| | || || || | ||| | Sbjct 1696432 CATCCTTTTCAACCCTCTGCATAAATAAATCAGGTATCCACAATGCATAAAACAAATCTC 1696491 Query 66381 GTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCG 66439 ||| ||||| ||||| |||| ||| || || ||| || ||||| ||||| || || Sbjct 1696492 TTGCACGTTGTTCCTCTTTGCCAGTG-TTCTTTTTCAAATCAAGGAAGTCAAAAATATCA 1696550 Query 66440 GCATGCCATGGTTCCAGGTAGATGGCGAA 66468 |||||||| || || | ||| || || || Sbjct 1696551 GCATGCCAAGGCTCTAAGTAAATAGCAAA 1696579 >seq16166 Length=1540 Score = 86.0 bits (94), Expect = 5e-12 Identities = 110/149 (74%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 66321 CATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGC 66380 |||||| ||| || | ||||||||| |||||||||||| | || || || | ||| | Sbjct 100 CATCCTTTTCAACCCTCTGCATAAATAAATCAGGTATCCACAATGCATAAAACAAATCTC 159 Query 66381 GTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCG 66439 ||| ||||| ||||| |||| ||| || || ||| || ||||| ||||| || || Sbjct 160 TTGCACGTTGTTCCTCTTTGCCAGTG-TTCTTTTTCAAATCAAGGAAGTCAAAAATATCA 218 Query 66440 GCATGCCATGGTTCCAGGTAGATGGCGAA 66468 |||||||| || || | ||| || || || Sbjct 219 GCATGCCAAGGCTCTAAGTAAATAGCAAA 247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397487891663120