Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq59859 668 0.0 seq34472 118 4e-24 seq440993 109 2e-21 seq392742 96.9 1e-17 seq96922 96.9 1e-17 seq131222 93.3 2e-16 seq282893 89.7 2e-15 seq97593 87.8 7e-15 seq479639 78.8 4e-12 >seq59859 Length=9336 Score = 668 bits (740), Expect = 0.0 Identities = 556/670 (83%), Gaps = 15/670 (2%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| ||||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct 4893 TGTAAAGTGCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 4834 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||| Sbjct 4833 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 4774 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| || | Sbjct 4773 TGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCAT 4714 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCG 260 | ||||| || ||| | | || ||| | | | | | ||| | Sbjct 4713 TTGATCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCAT 4657 Query 261 GTCA---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTT 317 ||| |||||||||||| | || || ||||||| || ||||||| || | | Sbjct 4656 TTCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCT 4598 Query 318 CGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCC 375 ||| || |||||||| | || |||| | ||| || ||||||||| | ||| | Sbjct 4597 CGGTAAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAA 4540 Query 376 GGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTC 435 | | ||||||||||| |||||||| || || |||||||||| |||||||||||||||||| Sbjct 4539 GTCAAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTC 4480 Query 436 TAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGT 495 |||| ||||||||||||||||||||| |||||| | ||||||||||||||||||| |||| Sbjct 4479 TAACGTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGT 4420 Query 496 GGGAACC-CGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTA 553 || || || || ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 4419 TGGGGCCTCGCAAGAGGTGCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTA 4360 Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4359 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 4300 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 ||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||| Sbjct 4299 GGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGT 4240 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 4239 ATAGGGGCGA 4230 >seq34472 Length=22889 Score = 118 bits (130), Expect = 4e-24 Identities = 97/116 (84%), Gaps = 4/116 (3%) Strand=Plus/Plus Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629 |||||||||||| ||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct 21875 GACCCGAAAGATAGTGAACTATGCCTGACGAGGGTGAAGCCCCAGGAAACTGGGGTGGAG 21934 Query 630 GCTCGCAGCGGTTCTGGCGTGCAAATCGAT--CGTCAAATTTGGGTATAGGGGCGA 683 || || ||| ||| || |||||||||| || |||| | ||||| |||||||||| Sbjct 21935 GCCCGTAGCCGTTGTGACGTGCAAATCCATGGCGTC--AGTTGGGCATAGGGGCGA 21988 >seq440993 Length=369 Score = 109 bits (120), Expect = 2e-21 Identities = 95/116 (82%), Gaps = 4/116 (3%) Strand=Plus/Plus Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629 |||||||||||| |||||||||||||| ||||||||||| |||||||| |||||| Sbjct 197 GACCCGAAAGATAGTGAACTATGCCTGGCGAGGGTGAAGCCCCAGGAAACTGGAGTGGAG 256 Query 630 GCTCGCAGCGGTTCTGGCGTGCAAATCGAT--CGTCAAATTTGGGTATAGGGGCGA 683 || || ||| ||| || |||||||||| || |||| | ||||| |||||||||| Sbjct 257 GCCCGTAGCCGTTGTGACGTGCAAATCCATGGCGTC--AGTTGGGCATAGGGGCGA 310 >seq392742 Length=897 Score = 96.9 bits (106), Expect = 1e-17 Identities = 92/116 (79%), Gaps = 4/116 (3%) Strand=Plus/Plus Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629 |||||||||||| |||||||||||||| ||||||||||| |||||||| ||||| | Sbjct 654 GACCCGAAAGATAGTGAACTATGCCTGGCGAGGGTGAAGCCCCAGGAAACTGGGGTGGTG 713 Query 630 GCTCGCAGCGGTTCTGGCGTGCAAATCGAT--CGTCAAATTTGGGTATAGGGGCGA 683 || || ||| ||| | |||||||||| || |||| | ||||| || ||| ||| Sbjct 714 GCCCGTAGCCGTTAGGACGTGCAAATCCATGGCGTC--AGTTGGGCATGGGGTCGA 767 >seq96922 Length=1680 Score = 96.9 bits (106), Expect = 1e-17 Identities = 89/112 (79%), Gaps = 2/112 (2%) Strand=Plus/Minus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||| | |||| |||||||||||| |||||||||||||| ||||||||||| || Sbjct 1298 GAGCACATATGTTATGACCCGAAAGATAGTGAACTATGCCTGGCGAGGGTGAAGCCCCAG 1239 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGAT--CGTCA 664 |||||| ||||| ||| || ||| ||| | |||||||||| || ||||| Sbjct 1238 GAAACTGGGGTGGTGGCCCGTAGCCGTTAGGACGTGCAAATCCATGGCGTCA 1187 >seq131222 Length=1041 Score = 93.3 bits (102), Expect = 2e-16 Identities = 89/112 (79%), Gaps = 4/112 (4%) Strand=Plus/Minus Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629 |||||||||||| |||||||||||||| ||||||||||| |||||||| ||||| | Sbjct 389 GACCCGAAAGATAGTGAACTATGCCTGGCGAGGGTGAAGCCCCAGGAAACTAGGGTGGTG 330 Query 630 GCTCGCAGCGGTTCTGGCGTGCAAATCGAT--CGTCAAATTTGGGTATAGGG 679 || || ||| ||| | |||||||||| || |||| | ||||| || ||| Sbjct 329 GCCCGTAGCCGTTAGGACGTGCAAATCCATGGCGTC--AGTTGGGCATGGGG 280 >seq282893 Length=390 Score = 89.7 bits (98), Expect = 2e-15 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| | |||||| |||| |||| |||||| | | |||||| |||||| Sbjct 120 GAGTCGTGTTGCTTGATAGTGCAGCACTAAGTGGGTGGTAAACTCCATCTAAAACTAAAT 61 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTG 156 || | ||||||||||| ||||||| |||| ||||| ||||||| ||| || Sbjct 60 ATAACCATGAGACCGATAGTAAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTCTG 4 >seq97593 Length=1658 Score = 87.8 bits (96), Expect = 7e-15 Identities = 108/144 (75%), Gaps = 3/144 (2%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| ||||||| |||| || ||||| | ||||| ||||||| Sbjct 1174 GAGTCGCGTTGCTTGTACATGCAGCGCTAAGCAGGTCGTAAACTCGATCTAAGGCTAAAT 1233 Query 100 ATTGGC-CAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 || | |||| |||||||| | ||||||| | | ||||| ||||||| ||| |||| Sbjct 1234 ATATCCACAGA-ACCGATAGTGAACAAGTACCATAAGGGAAAGTTGAAAAGAACTCTGGA 1292 Query 159 AAGAGAGTTAAAAAGCACGTGAAA 182 |||||||| ||||| ||||||| Sbjct 1293 GAGAGAGTT-AAAAGACCGTGAAA 1315 >seq479639 Length=268 Score = 78.8 bits (86), Expect = 4e-12 Identities = 88/115 (77%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 58 ATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGC-CAGAGACCGAT 116 ||||||| |||| || ||||| | ||||| ||||||||| | |||| |||||| Sbjct 266 ATGCAGCGCTAAGCAGGTCGTAAACTCGATCTAAGGCTAAATATATCCACAGA-ACCGAT 208 Query 117 AGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAA 171 || | ||||||| || | ||||| ||||||| ||| |||| |||||||||||| Sbjct 207 AGTGAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTCTGGAGAGAGAGTTAAAA 153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2059049892250