Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq852895 82.4 2e-13 seq479639 78.8 2e-12 seq97593 78.8 2e-12 >seq852895 Length=355 Score = 82.4 bits (90), Expect = 2e-13 Identities = 82/101 (81%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 271 CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTA 330 |||||||| | ||| ||| |||| | ||||| | ||||||||| |||||||| |||||| Sbjct 10 CGGTTTCACGGTCT-TTTGACTCTC-TCTCCAGAGTTCTTTTCAACTTTCCCTTACGGTA 67 Query 331 CTAGTTCACTATCGG-TCAGTCAGTAGTATTTAGCCTTGGA 370 || |||||||||||| || || || ||||||||||| || Sbjct 68 CTTGTTCACTATCGGTTCTGTGGATA-TATTTAGCCTTAGA 107 >seq479639 Length=268 Score = 78.8 bits (86), Expect = 2e-12 Identities = 81/101 (80%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 271 CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTA 330 |||||||| ||| ||| |||| | ||||| | ||||||||| |||||||| |||||| Sbjct 140 CGGTTTCAAAGTCT-TTTAACTCTC-TCTCCAGAGTTCTTTTCAACTTTCCCTTACGGTA 197 Query 331 CTAGTTCACTATCGG-TCAGTCAGTAGTATTTAGCCTTGGA 370 || |||||||||||| || || || ||||||||||| || Sbjct 198 CTTGTTCACTATCGGTTCTGTGGATA-TATTTAGCCTTAGA 237 >seq97593 Length=1658 Score = 78.8 bits (86), Expect = 2e-12 Identities = 81/101 (80%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 271 CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTA 330 |||||||| | ||| ||| |||| | ||||| | ||||||||| |||||||| | |||| Sbjct 1318 CGGTTTCACGGTCT-TTTAACTCTC-TCTCCAGAGTTCTTTTCAACTTTCCCTTATGGTA 1261 Query 331 CTAGTTCACTATCGG-TCAGTCAGTAGTATTTAGCCTTGGA 370 || |||||||||||| || || || ||||||||||| || Sbjct 1260 CTTGTTCACTATCGGTTCTGTGGATA-TATTTAGCCTTAGA 1221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1229473354880